Gene Information

Name : Caci_8842 (Caci_8842)
Accession : YP_003119496.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Virulence
Product : family 2 glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 10250589 - 10251752 bp
Length : 1164 bp
Strand : -
Note : PFAM: glycosyl transferase family 2; KEGG: sco:SCO4875 sugar transferase

DNA sequence :
ATGCGTCTGTCCCTGGTCGTCCCGTGCTTCAACGAAGAAGCGGTTTTGGCGAGGTTCCACGAGGTGGTCCGGGCGGAAAC
CGCGGGGATAGCGGACGAGGTGGAGCTGGTCTTCGTCGACGACGGCTCCCGGGACGGCACCCTGGAGCTGCTGAAGAAGA
TCGCCGCTCAGGACCCCGAAGCCAAGTACGTCTCGCTGAGCCGCAACTTCGGCAAGGAGTCCGCGATCCTGGCCGGCCTG
AAGCGGGCCAGCGGGGACGCGGTGATCATCCTGGACGCCGACCTGCAGCACCCGCCGGCGCTGCTGGGCCGCATGATCGA
CCTGCACAAGCAGGGCTTCGACCAGGTCATCGCCCAGCGCGACCGGGAGGGTGACAAGAGGTTCAAGAGCCTGGTCGCCA
AGACCTACTACAAGCTGATCAACCGGATGGTCGACGTCGAGCTGGTGGACGGGGTCGGCGACTTCCGGCTGCTGTCCCGG
CGCGCGGTGAACGCCCTGCTGGAGATGCCGGAGTACAACCGCTTCTCCAAGGGCCTGTTCGCGTGGATCGGCTTCGACTC
GGTCACCTTCAACTACCGCAACGCGGTGCGCGAGGCCGGGGAGACCAAGTGGTCCTTCCGGCGGCTGCTGGACTACGGCG
TGGATTCGCTGCTGTCGTTCAACAACAAGCCGCTGCGCCTGGCGATCTACCTGGGCTTCCTGTTCTTCGGCGTCTCCTTC
GTCTACATGGTGTGGCTCATCGTGCGCACGATGGTGAGCGGCGACACCACGCCCGGCTACGTCACCACGATCGCGGCCAT
CGTCGGCATCGGCGGCCTGCAGATGTTCACGGTCGGCGTGATCGGCGAGTACGTCGGACGCATCTACTACGAGTCCAAGC
AGCGTCCGCACTATCTGGTCAAGGAGACCGAGGCCGGCCCGCTGCGGCACCAGAGCGACTTCCTGGCCATCTCCGGGGAC
CACCGCTCGGCGCCGGCCGCGGCCCGGACCGAGTCTCGCCCCGAGCCGTCCACGGAGTCCCGCACAGAGCCCCGCACAGA
GTCCCGCACAGAGTCAGAGTCAGAGTCCCGTCCCGCGGCGCAGGCCGAGCCGCCCGCGCCGGACGAGCAGGCCGAACCGG
TCAACGGCGTCCCCGGGGCGCGAGAGCTGAACGGAATCCAGTGA

Protein sequence :
MRLSLVVPCFNEEAVLARFHEVVRAETAGIADEVELVFVDDGSRDGTLELLKKIAAQDPEAKYVSLSRNFGKESAILAGL
KRASGDAVIILDADLQHPPALLGRMIDLHKQGFDQVIAQRDREGDKRFKSLVAKTYYKLINRMVDVELVDGVGDFRLLSR
RAVNALLEMPEYNRFSKGLFAWIGFDSVTFNYRNAVREAGETKWSFRRLLDYGVDSLLSFNNKPLRLAIYLGFLFFGVSF
VYMVWLIVRTMVSGDTTPGYVTTIAAIVGIGGLQMFTVGVIGEYVGRIYYESKQRPHYLVKETEAGPLRHQSDFLAISGD
HRSAPAAARTESRPEPSTESRTEPRTESRTESESESRPAAQAEPPAPDEQAEPVNGVPGARELNGIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 8e-52 42
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 4e-52 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_8842 YP_003119496.1 family 2 glycosyl transferase VFG0670 Protein 8e-53 42