Gene Information

Name : Caci_8813 (Caci_8813)
Accession : YP_003119467.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 10217265 - 10219070 bp
Length : 1806 bp
Strand : -
Note : TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: ace:Acel_0052 thiamine biosynthesis protein ThiC

DNA sequence :
ATGACGGCTGTCAATGATGTGTCCGCATCGTCTGAATCCACCGAATCATCCGATTCCGCTGGTACCTCTGATTCCTCTGG
TTCCTCAGCTTCGAGCAAGACCTACCTGCCCTCCGCCGTGCGCCCCGAGCTGCGCGTGCCGATGCGCCAGATCGCGCTGA
CCAACGGCGACTCGGTCGTCCTGTACGACACCTCCGGTCCCTACACCGACCCCGAGGTGCGCACCGACGTCCGCTTCGGC
CTGCCGGCGCTGCGCGCTCCGTGGATCGCCGAGCGCGGCGACACCGCGGAGTACGACGGCCGGACCTGGCAGCCGACCGA
CGACGGGCTGAAGTCGGCCGACCTGCGCAACCTCGACGCCGTGTTCTCCGGTGGACGCAAGCCGGTGCGCGGGACGGAGG
AGCGGGGCGCGGTCACGCAGCTCGCCTATGCCCGGCGCGGCCTCGTCACCGCCGAGATGGAGTACATCGCGGTGCGGGAG
GGGGTCACCGCGGAGTTCGTGCGGGACGAGGTCGCGCGGGGGCGGGCGGTCATCCCGGCCAACGTCAACCACCCCGAGGC
CGAGCCGATGATCATCGGCCGCCACTTCCTGACCAAGGTGAACGCCAACATCGGCAACTCCTCGGTCGCCTCCTCGATCG
AGGAGGAGGTGGACAAGATGGTGTGGGCCACGCGCTGGGGCGCCGCCACCGTGATGGACCTGTCCACCGGCCGGAACATT
CACACCACCCGCGAATGGATCCTGCGCAACAGCCCGGTCCCGATCGGCACCGTGCCGATCTACCAGGCGCTGGAGAAGGT
CAACGGCAAGGCCGAGGACCTCACCTGGGAGGTGTTTCGCGACACCGTGATCGAGCAGTGCGAGCAGGGCGTGGACTACA
TGACGATCCACGCCGGCGTGCTGCTGCGCTACGTCCCGCTGACCGCCAACCGCAAGACCGGCATCGTCTCGCGCGGCGGC
TCGATCATGGCCGCCTGGTGCCTGGCGCACCACGAGGAGAACTTCCTCTACACGAACTTCAGGGAACTGACGCAGATCCT
GGCGCGCTACGACGTCACCTACTCCCTCGGCGACGGCCTGCGCCCCGGCTCCATCTATGACGCCAACGACGCGGCCCAGT
TCGCCGAACTGACCACCCTCGGCGAACTGTCGAAGATCGCCCGCGAGCTCGGCGTCCAGGTGATGATCGAGGGCCCGGGC
CACGTCCCGATGCACAAGATCAAGGAGAACGTCGAGCTCCAGATGGAGCTCTGCGACGAGGCGCCCTTCTATACCCTCGG
CCCGCTCACCACCGACATCGCCCCCGGCTACGACCACATCACCTCCGCCATCGGCGCGGCGATGATCGGCTGGTACGGCA
CCGCGATGCTCTGCTACGTGACGCCCAAGGAACACCTGGGCCTGCCCAACCGCGACGACGTCAAGCAAGGCCTGATCGCC
TACAAGATCGCCGCCCACGCCTCCGACCTCGCCAAGGGCCACGAAGGCGCCCAGCGCTGGGACGACGCACTGTCCGACGC
CCGTTTCGAATTCCGCTGGGAAGACCAGTTCAACCTGGCCCTGGACCCCGACACCGCCCGCGCCTACCACGACGAGACCC
TGCCGGCCGCCCCCGCGAAGACCGCGCACTTCTGCTCCATGTGCGGCCCGCACTTCTGCTCCATGCAGATCAGCCGCAAC
ATCGCGGAGCAATACGGCGACCAGATGGCCGCCACCGACGACGGCGAGATCAAGGCCGGCATGGACGCGAAGTCCGCAGA
GTTCCTCGCCTCCGGCGCGCAGGTCTACCTGCCTCTCGCGGACTGA

Protein sequence :
MTAVNDVSASSESTESSDSAGTSDSSGSSASSKTYLPSAVRPELRVPMRQIALTNGDSVVLYDTSGPYTDPEVRTDVRFG
LPALRAPWIAERGDTAEYDGRTWQPTDDGLKSADLRNLDAVFSGGRKPVRGTEERGAVTQLAYARRGLVTAEMEYIAVRE
GVTAEFVRDEVARGRAVIPANVNHPEAEPMIIGRHFLTKVNANIGNSSVASSIEEEVDKMVWATRWGAATVMDLSTGRNI
HTTREWILRNSPVPIGTVPIYQALEKVNGKAEDLTWEVFRDTVIEQCEQGVDYMTIHAGVLLRYVPLTANRKTGIVSRGG
SIMAAWCLAHHEENFLYTNFRELTQILARYDVTYSLGDGLRPGSIYDANDAAQFAELTTLGELSKIARELGVQVMIEGPG
HVPMHKIKENVELQMELCDEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGTAMLCYVTPKEHLGLPNRDDVKQGLIA
YKIAAHASDLAKGHEGAQRWDDALSDARFEFRWEDQFNLALDPDTARAYHDETLPAAPAKTAHFCSMCGPHFCSMQISRN
IAEQYGDQMAATDDGEIKAGMDAKSAEFLASGAQVYLPLAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 64
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 64
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 1e-167 58