Gene Information

Name : Caci_8412 (Caci_8412)
Accession : YP_003119076.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Unknown
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 9739109 - 9739828 bp
Length : 720 bp
Strand : -
Note : PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sgr:SGR_4105 two-component system response regulator

DNA sequence : 
TTGAGCCAGACCACGCCGGAACCGACCGAAGCGCCGGGATCCGCCGATCCCGCCGCCCCCATCCGCATCGTCCTGGTCGA
CGACCAGGAACTGCTGCGCACGGGCTTCCGCATGGTCCTGAACAGCCAGCCCGACATGGCAGTGGTCGGCGAGGCAGGCG
ACGGCCAAGTCGCCCTGGACCTGCTCACCAGGTTGCAGGCCGACGTGGTCCTGATGGACGTCCGCATGCCCCGCCTCGAC
GGCGTCGCCGCCACCCGCGAGATCGTGGTCCGCGGCGAACGTCCCCGAGTCCTGATGCTCACCACTTTCGACCTCGACGA
GTACGCCTTCACAGCCCTCAAAGCAGGCGCCAGCGGCTTCCTCCTCAAGGACGTCCCACCCCCGGACCTCCTCGCCGCCA
TCCGCGCCGTCCACAGCGGCGAGGCAGTGGTCGCCCCCTCCACCACCCGCCGCCTCCTCGACAAGTTCGCCCCGATGCTC
CCCTCCGAGAGCGAACCCGCCCCACCGGAACTGACCGTCCTGACCGACCGCGAGCACGAGGTCCTGCTCCTGGTCGCGCA
AGGCATGTCCAACGCCGAGATCGCCGGCAAACTGTTCCTGTCCGAGGCCACGGTGAAGACCCACGTCGGCCGCATCCTGA
TGAAGCTCGGCCTCCGCGACCGCGTCCAGGCCGTGGTGCTGGCCTACGAGACCGGGCTGGTGAAGGCGCGGGGACGGTAG

Protein sequence : 
MSQTTPEPTEAPGSADPAAPIRIVLVDDQELLRTGFRMVLNSQPDMAVVGEAGDGQVALDLLTRLQADVVLMDVRMPRLD
GVAATREIVVRGERPRVLMLTTFDLDEYAFTALKAGASGFLLKDVPPPDLLAAIRAVHSGEAVVAPSTTRRLLDKFAPML
PSESEPAPPELTVLTDREHEVLLLVAQGMSNAEIAGKLFLSEATVKTHVGRILMKLGLRDRVQAVVLAYETGLVKARGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0091 NP_938488.1 two-component system response regulator Not tested Not named Protein 8e-33 44
CD241_0088 YP_005124357.1 two-component system response regulator Not tested Not named Protein 7e-33 44
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 6e-31 42