Gene Information

Name : Caci_0835 (Caci_0835)
Accession : YP_003111610.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 971250 - 971918 bp
Length : 669 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sma:SAV_3481 two-component system response regulator

DNA sequence : 
ATGACCCGTGTACTGCTCGCCGAGGACGACGCCGCCATTTCCGAACCGCTGGCGCGGGCGCTTCGACGCGAGGGCTACGA
GGTCACCGTCCGGGCGGACGGTCCAGGCGCCCTTCTGGCCGGGCAGAGCGGCGTCGACCTGGTCGTTCTCGACCTGGGCC
TGCCGGGCATGGACGGCCTGGAGGTCTGCCGCCGGCTGCGCGCCGACGGCCACACCTTCCCCGTCTTGGTGTTGACAGCG
CGCGCCGACGAGGTGGACACCGTGGTCGGGCTGGACGCCGGCGCCGACGACTACGTCACCAAGCCCTTCCGGCTGGCCGA
GCTGCTGGCCCGGGTCCGCGCGCTGCTCCGGCGCGGCACCCCCGACCTGGGCAACGGCGTGCACGGCGTCCGGATAGACA
TCGAGTCGCACCGCGCCTACCTGGGCGACCAGGAGCTGAACCTGACCGCCAAGGAGTTCGACCTGCTCCGGGTGCTGGTC
CGCGAGGTCGGCCGGGTGGTCACCCGGGACCAGCTGATGCGCGAGGTCTGGGACACCACCTGGTGGTCCTCCACCAAGAC
CCTGGACATGCACATCTCCTGGTTGCGCAAGAAGCTCGGCGACGAGGCCTCCCGCCCGCGGTTCATCACCACGGTGCGCG
GCGTCGGCTTCCGCTTCGAGCGCGGTTAG

Protein sequence : 
MTRVLLAEDDAAISEPLARALRREGYEVTVRADGPGALLAGQSGVDLVVLDLGLPGMDGLEVCRRLRADGHTFPVLVLTA
RADEVDTVVGLDAGADDYVTKPFRLAELLARVRALLRRGTPDLGNGVHGVRIDIESHRAYLGDQELNLTAKEFDLLRVLV
REVGRVVTRDQLMREVWDTTWWSSTKTLDMHISWLRKKLGDEASRPRFITTVRGVGFRFERG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-11 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_0835 YP_003111610.1 two component transcriptional regulator AE000516.2.gene3505. Protein 1e-24 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_0835 YP_003111610.1 two component transcriptional regulator VFG1390 Protein 8e-22 43
Caci_0835 YP_003111610.1 two component transcriptional regulator VFG0473 Protein 7e-12 43
Caci_0835 YP_003111610.1 two component transcriptional regulator VFG1389 Protein 5e-17 42
Caci_0835 YP_003111610.1 two component transcriptional regulator VFG0596 Protein 3e-11 41