Gene Information

Name : Caci_8290 (Caci_8290)
Accession : YP_003118954.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 9606068 - 9606829 bp
Length : 762 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sco:SCO1032 ABC transporter ATP-binding protein

DNA sequence :
ATGACCACCACGACCGGCACCACCTCCAGCACCCTCACGGCGCCCGCCGCCCGCGCGGTCGCCGCGGTCAAGCAGTACGG
CGGCGGCGACGCGGCCGTCCGCGCCCTCGACGGCGTGACGGTCGCGCTCGCCGCCGGCCGCTTCACCGCCGTCATGGGCC
CGTCCGGATCGGGCAAGTCGACGCTCTTGCACTGCCTGGCCGGCCTGGACCGGCTCACCTCGGGCCAGGCGTACGTCGGC
GACGTCGAACTCGGCTCCGCCTCCGACAAGCAGCTGACGCTCCTGCGGAGGGAGAAGCTCGGCTTCGTCTTCCAGTCCTT
CAACCTCCTGCCGACCCTCTCGGCGGCGGAGAACATCACGCTGCCGCTGGACCTGGCCGGCCGCTCCCCGGACAAGGACT
GGCTCGACACCGTCGTCGGCACCGTCGGGCTGACGGACCGCCTCAAGCACCGCCCCGCCGAGCTCTCCGGCGGCCAACAG
CAGCGCGTGGCGGTCGCGCGCGCCCTTGTCTCGCGTCCGGAAGTCGTCTTCGCCGACGAGCCCACGGGAAACCTCGATTC
CCGGTCCGCCGCCGAGGTTCTGGGCCTGCTGCGCACCATGGTCACCGACCTCGGCCAGACCCTGGTGATGGTCACCCACG
ATCCCTCGGCCGCCGCCTACGCCGACGAGGTCCTGTTCCTCGCCGACGGCCGCCTCGTGGACCGCCTGGAGCAGCCCACG
CGCGATTCCGTCCTGGCCCGCATGCAGCGCTTCGGCGAGTAA

Protein sequence :
MTTTTGTTSSTLTAPAARAVAAVKQYGGGDAAVRALDGVTVALAAGRFTAVMGPSGSGKSTLLHCLAGLDRLTSGQAYVG
DVELGSASDKQLTLLRREKLGFVFQSFNLLPTLSAAENITLPLDLAGRSPDKDWLDTVVGTVGLTDRLKHRPAELSGGQQ
QRVAVARALVSRPEVVFADEPTGNLDSRSAAEVLGLLRTMVTDLGQTLVMVTHDPSAAAYADEVLFLADGRLVDRLEQPT
RDSVLARMQRFGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-39 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_8290 YP_003118954.1 ABC transporter CP001581.1.gene598.p Protein 9e-49 49
Caci_8290 YP_003118954.1 ABC transporter NC_008702.1.4606598. Protein 9e-35 46
Caci_8290 YP_003118954.1 ABC transporter CP001581.1.gene798.p Protein 4e-44 46
Caci_8290 YP_003118954.1 ABC transporter NC_012469.1.7686878. Protein 4e-41 45