Gene Information

Name : Caci_8137 (Caci_8137)
Accession : YP_003118801.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 9435144 - 9435920 bp
Length : 777 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: fre:Franean1_4887 ABC transporter

DNA sequence : 
ATGTCCGCCACCACCCGAGAGCCCGCCCCCAGCGGCTACGCGGTCCTCGCCCGCGACCTCGTCAAGACCTACGGCTCCGG
CGCGACCGCCGTCCGCGCGCTCGACGGCGTCACCGTCGGCTTCGGCCAGGGGGAGTTCACCGCGATCATGGGCCCGTCCG
GGTCCGGCAAGTCCACGCTGATGCACTGCCTGGCCGGCCTGGACACCGCCACCGCCGGCTCGGTGCAGATCGGCGGGGTG
GAGCTGACCAAGCTGAACGACAAGGCCCTGACCCTGCTGCGCCGCCGCCGGATCGGCTTCATCTTCCAGTCGTTCAACCT
GCTGCCCACGCTGACCGCCGAGCAGAACATCCTGCTGCCGCTGGACCTGGCCGGCCTCAAGCCGCCGAAGCAGTGGTGGG
ACCAGGTGATCGGGGTCCTGGACCTCGGCGCGCGGCTCAAGCACCGCCCCGGCGAGCTCTCCGGCGGGCAGCAGCAGCGC
GTGGCGTGCGCCCGGGCGCTGATGAGCCGCCCGGAGGTGGTCTTCGCCGACGAGCCGACCGGCAACCTGGACTCCCGCTC
GGGCGCCGAGGTGCTGGCGTTCCTGCGGATGAGCGTGCGCGAGTTGGGCCAGACCGTGGTGATGGTCACCCACGACACGA
CCGCCGCTTGCGCTGCAGACCGCGCGGTGTTCCTCGCCGACGGCGTCATGCGCGGCGACGTCCTGTCTCCGACTCCGGAC
TCGGTGACCGCGCAGCTGCGCATGATCCGTCCGGACCGCGTCGCGGCCGGGGAGTGA

Protein sequence : 
MSATTREPAPSGYAVLARDLVKTYGSGATAVRALDGVTVGFGQGEFTAIMGPSGSGKSTLMHCLAGLDTATAGSVQIGGV
ELTKLNDKALTLLRRRRIGFIFQSFNLLPTLTAEQNILLPLDLAGLKPPKQWWDQVIGVLDLGARLKHRPGELSGGQQQR
VACARALMSRPEVVFADEPTGNLDSRSGAEVLAFLRMSVRELGQTVVMVTHDTTAACAADRAVFLADGVMRGDVLSPTPD
SVTAQLRMIRPDRVAAGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_8137 YP_003118801.1 ABC transporter CP001581.1.gene598.p Protein 1e-51 48
Caci_8137 YP_003118801.1 ABC transporter CP001581.1.gene798.p Protein 2e-47 48
Caci_8137 YP_003118801.1 ABC transporter NC_008702.1.4606598. Protein 1e-36 44
Caci_8137 YP_003118801.1 ABC transporter NC_012469.1.7686878. Protein 2e-41 42