Gene Information

Name : Caci_7925 (Caci_7925)
Accession : YP_003118589.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 9199098 - 9199784 bp
Length : 687 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: fra:Francci3_0812 ABC transporter

DNA sequence : 
ATGAGCGAGTACATCCTGGAGGCGCGAGACGTACACCGCGCCTTCGGTCAGACACAGGCGCTGCGCGGGGCGAGCGTCGC
GGTGCGGCGCGGGGAGCTGCTGGCGATCATGGGACCGTCCGGGTCCGGGAAGTCGACGCTGCTGCACTGCCTGGCCGGCA
TCTACGCGCCGAACCAGGGCGAGGTGTGGTTCGACGGCGCGCGGGTCGACACCCTCGGCGAGACCAAGCGCACCGAGCTG
CGGCGCGACGCCTTCGGGTTCGTGTTCCAGTTCGGCCAGCTGGTGCCCGAGCTGACCGCGCTGGACAACGTCGCGCTGCC
GCTGCTGCTGGCCAAGAAGCCGCGCCGGCAGGCGTACGCGCAAGCCGCGCCCTGGCTGGAGCGCCTGGGACTGCAGGAGC
ACGGCGACCACCGCAGCGGCGAGCTGTCCGGCGGCCAGGCGCAGCGCGTCGCGCTGGCCCGCGCGCTGGTGCACCAGCCG
CGGGTGCTGTTCGCCGACGAGCCGACCGGGGCGCTGGACACCCTCACCGGCGAGGCTGTGATGGACCTGCTGGTCAGCAC
GGCCCGCGAGGAGGGGACCACCGTCGTGCTGGTCACCCACGACGCCCGGGTCGCCGCCTACGCCGACCGCGAGATCGTCG
TGCGCGACGGCCGCGCGGTCACCACGCCGAGTTCGGCGGTGGCCTGA

Protein sequence : 
MSEYILEARDVHRAFGQTQALRGASVAVRRGELLAIMGPSGSGKSTLLHCLAGIYAPNQGEVWFDGARVDTLGETKRTEL
RRDAFGFVFQFGQLVPELTALDNVALPLLLAKKPRRQAYAQAAPWLERLGLQEHGDHRSGELSGGQAQRVALARALVHQP
RVLFADEPTGALDTLTGEAVMDLLVSTAREEGTTVVLVTHDARVAAYADREIVVRDGRAVTTPSSAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_7925 YP_003118589.1 ABC transporter NC_012469.1.7686878. Protein 2e-40 46
Caci_7925 YP_003118589.1 ABC transporter NC_008702.1.4606598. Protein 2e-32 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_7925 YP_003118589.1 ABC transporter VFG2059 Protein 4e-21 41