Gene Information

Name : Caci_7899 (Caci_7899)
Accession : YP_003118563.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 9170900 - 9171733 bp
Length : 834 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sco:SCO3111 ABC transporter ATP-binding protein

DNA sequence :
ATGACGACGGCAGCACACGCCGCGGTCACCCACCGAACCGTCGGCACCGCCGCCCGCGCCCAGGCCGTGACCAAGCGCTA
CGGCCAGGGGGAAACCTCGGTCGTCGCGCTGGACCAGGTCGACGTCGACATCGAGCGGGGCCGGTTCACCGCGATCATGG
GCCCGTCCGGGTCCGGCAAGTCCACGCTCATGCACTGCCTGGCCGGCCTGGACTCGGTCAGCGCGGGCAAGATCTGGATC
TACGGCCGCGACGGCGTGGCCAGCGAGCTCACCTCCATGAAGGACAAGGAGCTCACCAACCTGCGCCGGGACCGGATCGG
GTTCATCTTCCAGTCCTTCAACCTGCTGCCCACGCTGAACGCGGCGGAGAACATCACGCTGCCGATGGACATCGCCGGCC
GCAAGCCGAACAAGGCGTGGCTGGACCGGGTGATCGGCACCGTCGGGCTGGAGTCCCGGCTCAAGCACCGCCCCAGCGAG
CTCTCCGGCGGCCAGCAGCAGCGCGTGGCCGTGGCCCGCGCCCTGGCCGGCCAGCCGGAGATCATCTTCGGCGACGAGCC
CACCGGCAACCTGGACTCCCGCAGCGGCGCCGAGGTCCTGGGCTTCCTGCGGCGCTCGGTGGACGAGCTGGGCCAGACCT
TCGTCATGGTCACCCACGACCCGTCCGCGGCCGCCTACGCCGACCGCGTGCTGTTCCTGGCCGACGGCCGGATCGTCGAC
GACATGGCCGCGCCGACCGCCGACAAGGTCCTGGACCGGATGCGGCAGTTCGACACCCACGGCCACGCCGTGCACGACCA
GAACCTGCGCGGCGACGCCGCCGGGCAGCGCTGA

Protein sequence :
MTTAAHAAVTHRTVGTAARAQAVTKRYGQGETSVVALDQVDVDIERGRFTAIMGPSGSGKSTLMHCLAGLDSVSAGKIWI
YGRDGVASELTSMKDKELTNLRRDRIGFIFQSFNLLPTLNAAENITLPMDIAGRKPNKAWLDRVIGTVGLESRLKHRPSE
LSGGQQQRVAVARALAGQPEIIFGDEPTGNLDSRSGAEVLGFLRRSVDELGQTFVMVTHDPSAAAYADRVLFLADGRIVD
DMAAPTADKVLDRMRQFDTHGHAVHDQNLRGDAAGQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_7899 YP_003118563.1 ABC transporter CP001581.1.gene598.p Protein 2e-39 46
Caci_7899 YP_003118563.1 ABC transporter NC_008702.1.4606598. Protein 5e-32 46
Caci_7899 YP_003118563.1 ABC transporter CP001581.1.gene798.p Protein 5e-34 45
Caci_7899 YP_003118563.1 ABC transporter NC_012469.1.7686878. Protein 7e-32 43
Caci_7899 YP_003118563.1 ABC transporter NC_012469.1.7685735. Protein 5e-28 41