Gene Information

Name : Caci_7844 (Caci_7844)
Accession : YP_003118509.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 9102374 - 9103111 bp
Length : 738 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sco:SCO1335 oxidoreductase

DNA sequence :
ATGGAACGCGTCAGCATCATCACCGGAGGCGGCCGCGGGATCGGCCGCGCCACCGCGCTGCGCCTGGCCCGCGACGGCCA
TGACATCGCCTTCAGCTACCTCAGCGACGACGCCGCTGCCGAGGAGACCGCCGCGGAGGTCCGCGACCTCGGGCGCCGCT
GCGTGGCGGTCAAGATGGACACCACCGACGAGGCGGACGTCGACCGGCTCTTCGACACCGCGATCGGCGAACTCGGCGGG
CTCACGGGTCTGGTGAACAACGCCGGGCTGACCGGTCCGCTGACCCGGCTCGTCGACGCCGACGTGGCGGACATCCGCCG
GGTCGTGGACGTGAACGTGGTCGGCTACCTGCTCTGCTGCCGACGGGCGGCCAAGGAGCTGAGCAGCCGCGGAGGTGGCG
CGATCGTCAACGTCTCCTCCGGCGCGGCGACCCGCGGCGCGCCGAACGAGTACGTCCACTACGCCGCCGCCAAGGCCGCG
GTCGACTCGTTCACCGTCGGGCTGGCCCAGGAGTTGGGGCGGGAGGGAATCCGTGTGAACTCGGTGCAGGTCGGCATCAC
GCGGACCCGGATCCACGCCGACATGGGGGATCCGGATCGCGCGGAGAAGCGCGGCGCGCTGACGGCGCTGGGCCGACCCG
CCGAGCCCGAGGAGATCGCCGCCGCCATCGCGTGGCTGCTCAGCGACGAGGCGAGTTTCACCACCGGCGCGGTACTTCGG
GTGGCCGGCGGGAACTGA

Protein sequence :
MERVSIITGGGRGIGRATALRLARDGHDIAFSYLSDDAAAEETAAEVRDLGRRCVAVKMDTTDEADVDRLFDTAIGELGG
LTGLVNNAGLTGPLTRLVDADVADIRRVVDVNVVGYLLCCRRAAKELSSRGGGAIVNVSSGAATRGAPNEYVHYAAAKAA
VDSFTVGLAQELGREGIRVNSVQVGITRTRIHADMGDPDRAEKRGALTALGRPAEPEEIAAAIAWLLSDEASFTTGAVLR
VAGGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 7e-34 46
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 2e-30 42