Gene Information

Name : Caci_7841 (Caci_7841)
Accession : YP_003118506.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 9099416 - 9100324 bp
Length : 909 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: nfa:nfa53360 ABC transporter ATP- binding protein

DNA sequence :
ATGATCGAGATCGAGAACCTGACCAAGCGCTACGGCGCCAGGTACGCCGTGCGCGACCTGACGTTCAGCGTGCGTCCGGG
GCGGGTGACGGGCTTTCTGGGACCGAACGGCGCCGGGAAGTCCACGACGATGCGCGCGGTCCTCGGCCTGGATCTCCCGA
CCGCCGGCCGCGTCCTGGTCGACGGCCGGCCCTACGCCGCGCTGGAGCGTCCGCTGACCCACGTCGGCATGCTGCTCGAC
ACCGGGGGAGTGCACCCCGGCCGCAGTGCGCGGCAGCATCTGCGCGCGGTGGCCGCGGCGGGGAAGCTTTCGGAGCGGCG
GGTGGACGAGGTGCTGGCCCGCGTCGGGCTGACCGACGTGTCCCAGGACCGGGTCGGCGGCTACAGCCTCGGCATGCGGC
AGCGGCTGGGGATCGCGACCGCCCTGCTCGGCGATCCCGGGATCCTGATGTTCGACGAACCGGTCAACGGCCTGGATCCG
GAAGGCATCCGGTGGATCAGAGACCTGATGAAAGGGCTGGCGGCCGAGGGGCGCACGGTGTTCGTCTCCAGCCACCTGAT
GAGCGAGATGGAGAGCACCGCCGACCACCTGGTGGTCATTGGCCGCGGGCGGCTGATCGCCGACCTCCCGGCGCGCGAGT
TGATCGAGCGGTACGGCGGCGGATTTCTGAGCGTGCGCACCGATGATCCCGGTCGGCTGATCACAGTGCTGGCCGCCGCC
GGGGCTCAGGTGGCGCCGGAAGGTCCGGACACCCTGCGAGTGGTCGGGATGGCCGGGGACGCCGTGGCGCGGCTGGCTTA
CCAGGCCGGAGTGCTGGTGCTCGACGTGGTGCGGCGAGCGACGTCGTTGGAGGACGCGTATCTGCAGCTCACTGATGCGG
CAGTCGAGTATCGGGGGGTGGGGGCGTGA

Protein sequence :
MIEIENLTKRYGARYAVRDLTFSVRPGRVTGFLGPNGAGKSTTMRAVLGLDLPTAGRVLVDGRPYAALERPLTHVGMLLD
TGGVHPGRSARQHLRAVAAAGKLSERRVDEVLARVGLTDVSQDRVGGYSLGMRQRLGIATALLGDPGILMFDEPVNGLDP
EGIRWIRDLMKGLAAEGRTVFVSSHLMSEMESTADHLVVIGRGRLIADLPARELIERYGGGFLSVRTDDPGRLITVLAAA
GAQVAPEGPDTLRVVGMAGDAVARLAYQAGVLVLDVVRRATSLEDAYLQLTDAAVEYRGVGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 1e-41 44
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 1e-41 44
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 2e-44 42