Gene Information

Name : Caci_7810 (Caci_7810)
Accession : YP_003118475.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 9062107 - 9062892 bp
Length : 786 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: fre:Franean1_1654 ABC transporter

DNA sequence :
ATGACCGCTACCGCCGCCGAGTCCGCAGGGACCTCCGGGCCCGTCGAGCCCGCGTCCGTGTCCGCGTCCGTGTCCGAGTC
CGGATCCGCCTCCGGGCCCGCCGGGCCGATCGTCCGCCTCGACGCCATCCGCAAGGACTTCGGGGACACCGCCGCCCTCG
ACGGCGTCACCCTGCACATCCGCCAGGGCGAGGCTGTCGCCGTCATGGGCCCGTCCGGCTGCGGCAAGTCCACGCTGCTG
AACCTGGTCGCCGGGCTGGACCGGCCCAGCTCCGGCCGGGTCGTCGTGCACGGCGAAGACCTCGGCGCGCTGTCGGAGAC
CGGTCTGGCGCTGTTCCGCCGCCGCCGGATCGGGATGATCTTCCAGTTCTTCAACCTCATCGACGACCTGCCCGCGCTGG
ACAACGTCGCGCTGACCGCGCAGCTCGCCGGGGTCCCGGCGGGGCAGGCGCGGCGCCGGGCGCTGGAGCTGCTGGGCGAG
CTGGGCATCGCCGACCGCAAGAACGCCTACCCGCAGCAGCTGTCCGGCGGCGAGCGCCAGCGCGTCGCGGTGGCCCGGGC
CTTGATGAACCGGCCGGCGCTGCTGCTGGCCGACGAGCCGACCGGCGCGCTGGACAGCCGCTCCGGCGAGCAGGTGATGG
ATCTGCTGATCGACCTGAACCAGCTCGGGCAGACCCTGCTGATGGTGACCCACGACCAGCGCCTGGCGACCCGCTGCGCC
AGCCGCCTGGTCGAGGTCGCCGACGGCCGGATCGTGGCCGAGCGCGCGCTGGAGAGGACCGCGTGA

Protein sequence :
MTATAAESAGTSGPVEPASVSASVSESGSASGPAGPIVRLDAIRKDFGDTAALDGVTLHIRQGEAVAVMGPSGCGKSTLL
NLVAGLDRPSSGRVVVHGEDLGALSETGLALFRRRRIGMIFQFFNLIDDLPALDNVALTAQLAGVPAGQARRRALELLGE
LGIADRKNAYPQQLSGGERQRVAVARALMNRPALLLADEPTGALDSRSGEQVMDLLIDLNQLGQTLLMVTHDQRLATRCA
SRLVEVADGRIVAERALERTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-23 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-24 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-24 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-24 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_7810 YP_003118475.1 ABC transporter NC_008702.1.4606598. Protein 1e-31 47
Caci_7810 YP_003118475.1 ABC transporter NC_012469.1.7686878. Protein 2e-37 47
Caci_7810 YP_003118475.1 ABC transporter CP001581.1.gene798.p Protein 2e-34 41