|
Name : Caci_7670 (Caci_7670) Accession : YP_003118335.1 Strain : Catenulispora acidiphila DSM 44928 Genome accession: NC_013131 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 8898315 - 8899634 bp Length : 1320 bp Strand : + Note : KEGG: sma:SAV_5025 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase DNA sequence : GTGCGGATCACCGTGATCGGCACCGGGTACCTCGGTGTCACCCACGCCGCCTGCATGGCCGAGCTCGGTTTCGAGGTGAT GGGCCTGGACGTGGACGTGGAGAAGGTCGCCGCCCTGGCCTCCGGCCGCGTCCCGTTCTACGAGCCGGGACTGCAGGAGG TGCTGCGCGCGCAGATCGCCGCCGGCCGCCTGTCCTTCACCTCCGACCACGCCGAGCTGGCCGCGTGGGCCGGCGAGGGC GCGGTGCACTTCGTCTGCGTCGGCACGCCGCAGAAGAAGGGCGAGTACGCCGCCGACATGACCTATGTCGACGCCGCGTT CGAAGCCGTGGCCCGGGCCGTCGCGCACCAGGGCCGCACGCTGCTGGTCGGCAAGTCCACGGTCCCGGTCGGCACCGCCG CGCGGCTGGCCGAGCGGATCGCCGAGCTCGCGCCGGACGCCGAGCTGGCGTGGAACCCCGAGTTCCTGCGCGAGGGCCAC GCCGTGGAGGACACGCTGCACCCCGACCGCCTGGTGATCGGCGTGCGCTCGCCCGAGGCCGAGGCGGCGCTGCGCCAGGT CTACGGCCGGCTGCTCGAGGAGGACGTGCCGCTGGTGGTCACCGACTTCCCGACCGCCGAGCTGGTCAAGGTCTCGGCGA ACTCCTTCCTCGCGGTCAAGATCTCCTTCATCAACGCCATGGCAGAGGTGTGCGAGGCGGCCGGCGCCGACGTCATGCAG CTGTCCGAGGCGCTGTCCCACGACCCGCGCATCGGCGGCCGCTACCTGGTGCCGGGCCTGGGCTTCGGCGGCGGCTGCCT GCCCAAGGACATCCGGGCGTTCATGGCCCGGGCCGGCGAGCTCGGGGTGGACCAAGCGCTGGCCTTCCTCAAGGAGGTCG ACGCCATCAACATGCGGCGCCGGGCCCGGACCGTGGACCTGGCCCGCGAACAGTGCGACGGCTCGCTGCTCGGCAAGCGC GTCGCGGTCTGGGGCGCGGCGTTCAAGCCGGAGTCCGACGACATCCGCGACTCCCCCGCGCTGAACGTCGCGGCGTCCAT AAACCTGCAGGGCGCGCAGGTCACCGTCTACGATCCGAAGGCGATGGACAACGCGCGCAAGATGTTCCCGACCCTGTCCT ACGCCGGATCGGCGATGGAGGCCGCGGAGCAGGCCGACGTGATCCTGCACCTCACGGAGTGGCAGGAGTTCCGGGACCTT GACCCGGCGGCGGTCGGTGTGCAAGTCCGCAACACCCGGATCATCGACAGCCGCAACGCGCTGGACGCGGCGGCGTGGCG CGCGGCCGGCTGGACCTACCGGGCACTGGGACGGCCCTGA Protein sequence : MRITVIGTGYLGVTHAACMAELGFEVMGLDVDVEKVAALASGRVPFYEPGLQEVLRAQIAAGRLSFTSDHAELAAWAGEG AVHFVCVGTPQKKGEYAADMTYVDAAFEAVARAVAHQGRTLLVGKSTVPVGTAARLAERIAELAPDAELAWNPEFLREGH AVEDTLHPDRLVIGVRSPEAEAALRQVYGRLLEEDVPLVVTDFPTAELVKVSANSFLAVKISFINAMAEVCEAAGADVMQ LSEALSHDPRIGGRYLVPGLGFGGGCLPKDIRAFMARAGELGVDQALAFLKEVDAINMRRRARTVDLAREQCDGSLLGKR VAVWGAAFKPESDDIRDSPALNVAASINLQGAQVTVYDPKAMDNARKMFPTLSYAGSAMEAAEQADVILHLTEWQEFRDL DPAAVGVQVRNTRIIDSRNALDAAAWRAAGWTYRALGRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-71 | 50 |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-71 | 50 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-71 | 50 |
