Gene Information

Name : rph (Caci_7553)
Accession : YP_003118219.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 8752590 - 8753321 bp
Length : 732 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGTCAGCAGCACGCGTCGACGGCCGCAAAGTAGGCCAGCTCCGTCCGGTCACCCTGACCCGCAAGTGGTCGATCCATCC
CGAGGGCAGCGTCCTCGTGGAGTTCGGCCAGACCAAGGTGCTGTGCACCGCCAGCGTCACCGAAGGCGTCCCGCGCTGGC
TGCGGGGGAGCGGCAAGGGCTGGGTCACCGCCGAGTACGCGATGCTGCCCCGGGCCACCAACACCCGCGGCGACCGCGAG
TCCGTCAAGGGCAAGGTCGGCGGGCGCACCCAGGAGATCTCCCGGCTCATCGGGCGCGCGCTGCGGGCCGTGGTGGACAC
CAAGGCCCTCGGTGAGAACACCATCATCGTGGACTGCGACGTCCTGCAGGCCGACGGCGGCACCCGCACCGCGGCCATCA
CCGGCGCCTACGTGGCGCTGCAGGACGCGGTCACGTGGATGCGCGACAAGAAGATGATCAAGGCCTCGCGCGAGCCGCTG
GCCGGCTCGGTCTCGGCGGTCAGCGTCGGCATCATCGACGGCGTGCCGATGCTCGACCTCTGCTATGAGGAAGACGTCCG
CGCCGAGACCGACATGAACGTCGTGTGCACCGCCGACGGCAAGTTCGTCGAGGTCCAGGGCACCGCCGAGGGCGCCCCCT
TCGACCGCGCCGAGCTGGACGCGCTGCTCGACCTGGCCGCCGCCGGCTGCCGCGAGCTGGCTTCGCACCAGGTCAAGGCG
CTTCTGAGCTGA

Protein sequence :
MSAARVDGRKVGQLRPVTLTRKWSIHPEGSVLVEFGQTKVLCTASVTEGVPRWLRGSGKGWVTAEYAMLPRATNTRGDRE
SVKGKVGGRTQEISRLIGRALRAVVDTKALGENTIIVDCDVLQADGGTRTAAITGAYVALQDAVTWMRDKKMIKASREPL
AGSVSAVSVGIIDGVPMLDLCYEEDVRAETDMNVVCTADGKFVEVQGTAEGAPFDRAELDALLDLAAAGCRELASHQVKA
LLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-64 63