Gene Information

Name : Caci_7410 (Caci_7410)
Accession : YP_003118077.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 8593156 - 8594580 bp
Length : 1425 bp
Strand : +
Note : TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: ace:Acel_0923 L-glutamine synthetase

DNA sequence : 
ATGTTCTCGAACGCCGACGAGGTACTCAAGTACCTCAGGGACAACGACGTGAAAAGCGTCGACGTGCGGTTCTGTGACCT
GCCCGGTGTGATGCAGCACTTCACGGTGCCGGTCGAGTCGTTCGACGCCGACGTCTTCTCCCACGGCCTGGCCTTCGACG
GCTCCTCGATCCGCGGCTTCCAGGCGATCCACGAGTCGGACATGCAGTTGCTGCCCGACCCGACGACCGCGCGCCTGGAC
CCCTTCCGCGCCGAGAAGACCCTCAACATCAACTTCTTCATCCACGACCCGCTGACCGGTGAGGCCTACTCCCGCGACCC
GCGCAACGTGGCCAAGAAGGCCGAGGCGTACCTGAAGGGCACCGGCATCGCCGACACGTGCTACTTCGGCCCGGAGGCCG
AGTTCTACGTGTTCGACGACGTGCGCTTCGCCTCCGGTCCGGAGGAGAGCTACTACCACATCGACGCCGAGGCCGCGTTC
TGGAACACCGGGCGCGCCGAGGAGGGCGGCAACCGCGGCTACAAGCCGCGCGTGAAGGGCGGCTACTTCCCGGTCGCCCC
GAACGACCACTACACGGACCTGCGCGCCACGATGAGCCGCACGCTCATCGACTCCGGCCTGATCGTCGAGCGCCAGCACC
ACGAGGTCGGCTCGGCCGGCCAGGCGGAGATCAACTACCGCTTCAACACCCTGCTGGCCGCCGCCGACGACCTGATGCTG
TTCAAGTACATCATCAAGAACGTCGCCTGGCAGGCCGGCAAGACCGCGACCTTCATGCCGAAGCCCGTCTTCGGCGACAA
CGGCTCCGGCATGCACTGCCACCAGAGCCTGTGGAAGGACGGCGCCCCGCTGTTCTACGACGAGGTCGGCTACGCGGGCC
TGTCCGACACCGCCCGCCACTACATCGGCGGCCTCCTCAAGCACGCGCCCTCCCTGCTGGCCTTCACCAACCCGACGGTG
AACAGCTACCGCCGCCTGGTCCCCGGCTACGAAGCCCCGGTGAACCTGGTCTACTCCCAGCGCAACCGCTCGGCCTGCAT
CCGCATCCCGATCACCGGCTCGAACCCGAAGGCCAAGCGCATCGAGTTCCGCTGCCCGGACCCCTCCTCCAACCCGTACC
TGGCCTTCTCCGCCATGATGATGGCCGGCCTGGACGGCGTGAAGAACAAGATCGAGCCCATGGCCCCGGTCGACAAGGAC
CTCTACGAGCTCCCCCCGGACGAGCACGCCTCGATCCCCCAGGTCCCCGGCAGCCTCCCGGCCGTCCTCGACTCCCTCGA
GGCCGACCACGGCTACCTCCTCGAAGGCGGCGTCTTCACCCAGGACCTCATCGACACCTGGATCTCCTACAAGCGCGAGC
GCGAGGTCGACCCGGTCCGCCTGCGCCCGACGCCGCACGAGTTCGAGCTGTACTTCGACATCTAG

Protein sequence : 
MFSNADEVLKYLRDNDVKSVDVRFCDLPGVMQHFTVPVESFDADVFSHGLAFDGSSIRGFQAIHESDMQLLPDPTTARLD
PFRAEKTLNINFFIHDPLTGEAYSRDPRNVAKKAEAYLKGTGIADTCYFGPEAEFYVFDDVRFASGPEESYYHIDAEAAF
WNTGRAEEGGNRGYKPRVKGGYFPVAPNDHYTDLRATMSRTLIDSGLIVERQHHEVGSAGQAEINYRFNTLLAAADDLML
FKYIIKNVAWQAGKTATFMPKPVFGDNGSGMHCHQSLWKDGAPLFYDEVGYAGLSDTARHYIGGLLKHAPSLLAFTNPTV
NSYRRLVPGYEAPVNLVYSQRNRSACIRIPITGSNPKAKRIEFRCPDPSSNPYLAFSAMMMAGLDGVKNKIEPMAPVDKD
LYELPPDEHASIPQVPGSLPAVLDSLEADHGYLLEGGVFTQDLIDTWISYKREREVDPVRLRPTPHEFELYFDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-86 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_7410 YP_003118077.1 glutamine synthetase VFG1399 Protein 6e-179 75