Gene Information

Name : Caci_7160 (Caci_7160)
Accession : YP_003117830.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Unknown
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 8333228 - 8333902 bp
Length : 675 bp
Strand : +
Note : PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sma:SAV_6039 two-component system response regulator

DNA sequence :
ATGACGATCCGCGTGGTGATCGCCGACGACCAGCCCTTGCTGCGCACCGGATTCTCTGCTCTGGTCGGCTCCGCGCCGGA
CCTGGAGGTGGTCGGCGAGGCAGGGGACGGACGGGAGGCGGTGCGACTGGCGAAGGCGGCTCAGGCGGACGTCGTCCTGA
TGGACATCCGGATGCCGGTGCTCGACGGGCTCGCGGCCACTCGCCTGATCACCGGCGACGAAGACCTCGCCGGAGTCAAG
GTACTGATTCTCACGACGTTCGAGATCGACGAATACGTCTTCGAGGCGCTCCGCGCCGGCGCGAGCGGCTTCCTGGGCAA
GAGCGCCGAAGCCGACGAGCTGCTGGCGGCGATCCGCACCGTCGAACGCGGCGACGCGCTGCTATCCCCCGCCGCGACCA
AAGCCCTCATCTCCCGCTTCCTCACGACACCCGTCGCCCCGCGCCAGCTGGACCAAGCGCAACGCGGCGCCCTCGACGCC
CTCACCGACCGCGAGCGCCAGATCACCGGCTTCGTCGCCGAAGGCCTGTCCAACGACGAGATCGCCGCCCGCCTGGTCCT
CAGCCCGGCCACGGTCAAGACGCACGTCAACCGCGCCATGGTCAAGGTCGGGGCGCGGGATCGGGCGCAGTTGGTGGTCT
TCGCCCACCGCAGCGGTCTGGCCAGCGTCGGCTGA

Protein sequence :
MTIRVVIADDQPLLRTGFSALVGSAPDLEVVGEAGDGREAVRLAKAAQADVVLMDIRMPVLDGLAATRLITGDEDLAGVK
VLILTTFEIDEYVFEALRAGASGFLGKSAEADELLAAIRTVERGDALLSPAATKALISRFLTTPVAPRQLDQAQRGALDA
LTDRERQITGFVAEGLSNDEIAARLVLSPATVKTHVNRAMVKVGARDRAQLVVFAHRSGLASVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 8e-39 48
DIP0091 NP_938488.1 two-component system response regulator Not tested Not named Protein 3e-34 41
CD241_0088 YP_005124357.1 two-component system response regulator Not tested Not named Protein 1e-33 41