Gene Information

Name : Caci_6965 (Caci_6965)
Accession : YP_003117636.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 8053154 - 8053900 bp
Length : 747 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: fre:Franean1_1654 ABC transporter

DNA sequence :
ATGACGAATGCACCGATGATCGATCTTCGCGGCACGACGAAGAAATACGACGACGGCCCGCCCGCACTGGCCGGCGTCAC
CTTGTCCGTGGCGGCTGGTGAGTGCGTGGCGATCCTCGGCCATTCCGGCAGCGGCAAATCCACGCTGCTGAACCTGATCG
CGGGCCTGGACAAGCCCTCCAGCGGCACCGTGACCGTCGACGGCACCCGCGTGGACCAGCTGGGCGAGGCCGGTTCGGCG
AAGTACCGCCGGGCCTCGATCGGGATGATCTTCCAGTTCTTCAACCTGCTGGACGACCTGACCGTGCTGGACAACGTGCT
CATCCCGGCGCAACTGGCCGGGATGAGCAAGGGCGAGGCGAGGCGGCGGGCCGTCGAACTGCTCGGCACGCTGGGCATCG
ACCGGCACGCCAAGGCCTACCCGCAGCGGCTCTCCGGCGGCGAGCGCCAGCGCGTCGCAGTAGCCAGAGCCCTGATGAAC
TCCCCCGCGCTGCTGCTCGCCGACGAGCCCACCGGCGCGCTGGACTCGAGCTCGGCCGAGGACGTGCGCCGACTGCTGCT
GGATCTGAACGCCGACGGCCAGACCATCTTGCTGGTCACCCACGACGTGCAGCTGGCCGCCACCACCGCGCACCGCATCA
TCGAGTTGGTGGACGGCGCGGTCGCGCGGGACGTCGTCACCAGTGGCCGCGATGCCGCCGTGGCCGTCCGCACAACGCTG
ACCCGTCCGGCGGGAGAGGTCCGATGA

Protein sequence :
MTNAPMIDLRGTTKKYDDGPPALAGVTLSVAAGECVAILGHSGSGKSTLLNLIAGLDKPSSGTVTVDGTRVDQLGEAGSA
KYRRASIGMIFQFFNLLDDLTVLDNVLIPAQLAGMSKGEARRRAVELLGTLGIDRHAKAYPQRLSGGERQRVAVARALMN
SPALLLADEPTGALDSSSAEDVRRLLLDLNADGQTILLVTHDVQLAATTAHRIIELVDGAVARDVVTSGRDAAVAVRTTL
TRPAGEVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-20 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_6965 YP_003117636.1 ABC transporter NC_012469.1.7686878. Protein 5e-34 43
Caci_6965 YP_003117636.1 ABC transporter NC_008702.1.4606598. Protein 3e-28 42
Caci_6965 YP_003117636.1 ABC transporter CP001581.1.gene798.p Protein 5e-30 41
Caci_6965 YP_003117636.1 ABC transporter CP001581.1.gene598.p Protein 1e-26 41