Gene Information

Name : Caci_0681 (Caci_0681)
Accession : YP_003111457.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 790685 - 791536 bp
Length : 852 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: fre:Franean1_1654 ABC transporter

DNA sequence :
ATGACGAACCCGCCGATGATCGATCTGCGTGACGCGACGAAGAAATACGACGACGGCCCGCCCGCACTGGCCGGCGTGAC
CCTGTCCGTGGCCGCCGGGGAGTGCCTGGCGGTCCTGGGCCACTCCGGCAGCGGGAAGTCCACGCTGCTCAACCTGATCG
CGGGCCTGGACCGGCCGACCAGCGGGAGCGTGACGGTCGACGGCACGCGGGTGGACCAGCTCGGCGAGGCCGGCTCCGCC
AAGTACCGGCGGGCCTCGATCGGGATGATCTTCCAGTTCTTCAACCTGCTGGACGATCTGACCGTGCTGGACAACGTGCT
CATCCCGGCGCAGCTGGCCGGAATGGGCAAGAGCCAGGCCCGGCGCCGCGCCGGCGACCTGCTCGGCACGCTGGGCATCG
ACCGGCACGCCAAGGCCTACCCGCAGCGGCTCTCCGGCGGCGAGCGCCAGCGCGTCGCGGTCGCCAGGGCCCTGATGAAC
TCCCCCGCGCTGCTGCTCGCCGACGAGCCCACCGGTGCGCTGGACTCGCACTCCGCCGCCGACGTGCGCCAGCTGCTGCT
GGACCTCAACGGCGAGGGGCAGACCATCTTGCTGGTCACCCACGACGTCGAGCTGGCGGCGACGACCGCGCACCGGACCA
TCGAGCTGGTGGACGGTGCCGTGGCACGGGACGTGGTCGGCGGTGCGCCGCGGGGGGACGCATCGCCGACCCGGCCCGGG
GGTGCGGCGAACGCCGTCCGCACCGGCAATGCCGCCGCCGCAGCCGCCACCGCAGCCGCGACCGCAGCCAGCCCGACCGC
CGCCACGACCGCCACCGCCACCTTCGACGGCCCGTCGGGAGCAGTCCGATGA

Protein sequence :
MTNPPMIDLRDATKKYDDGPPALAGVTLSVAAGECLAVLGHSGSGKSTLLNLIAGLDRPTSGSVTVDGTRVDQLGEAGSA
KYRRASIGMIFQFFNLLDDLTVLDNVLIPAQLAGMGKSQARRRAGDLLGTLGIDRHAKAYPQRLSGGERQRVAVARALMN
SPALLLADEPTGALDSHSAADVRQLLLDLNGEGQTILLVTHDVELAATTAHRTIELVDGAVARDVVGGAPRGDASPTRPG
GAANAVRTGNAAAAAATAAATAASPTAATTATATFDGPSGAVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-24 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_0681 YP_003111457.1 ABC transporter NC_012469.1.7686878. Protein 8e-33 45
Caci_0681 YP_003111457.1 ABC transporter NC_008702.1.4606598. Protein 1e-28 44
Caci_0681 YP_003111457.1 ABC transporter CP001581.1.gene598.p Protein 2e-26 43