Gene Information

Name : Caci_5792 (Caci_5792)
Accession : YP_003116491.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : peptidase M15D vanX D-ala-D-ala dipeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2173
EC number : -
Position : 6692470 - 6693078 bp
Length : 609 bp
Strand : -
Note : PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: fre:Franean1_7136 peptidase M15D VanX D-ala-D- ala dipeptidase

DNA sequence :
GTGACCGACGACTTCGTCTTCGTGGACCAGCTCGTCCCCGGCGTCCGCTGGGACGCCAAATACGCGACCTGGGACAACTT
CACCGGCAAGCCGGTGGACGGCTACCTGGCGAACCGGATCGTCGGGACGACCGCCTTGTGCAGCGCACTGGAACGCGCGC
AGAAGGAGGCCGGCGTCCTCGGTTTCGGGCTGGTGCTCTGGGACGGCTATCGTCCGCAGCGCGCCGTGGACTGCTTCCTG
CGCTGGTCGCAGCAGCCCGAGGACGGTCGGACCAAGCCGCGCCACTACCCGAACATCGACCGCGCCGGGATGTTCGAGAA
GGGCTACGTCGCCGCCAAATCGGGCCACAGCCGCGGAAGCACAGTCGATCTGACGCTCTACGACCTGGCCACCGGCGACC
TGGCCGCAATGGGCGGCGGCCACGACCTGATGGACCCCGTCTCCCATCACGGCGCCAGCGGGATAACGCGAGCTGAGGAG
GCGAACCGGCTGGCGTTGCGCTCCGTCATGGAGGCCAGCGGTTTCCGACCGTACGACTGCGAGTGGTGGCACTACACGCT
GGAGGACGAGCCTTATCCGGAAACGTATTTCGACTTCCCTATTACCTAG

Protein sequence :
MTDDFVFVDQLVPGVRWDAKYATWDNFTGKPVDGYLANRIVGTTALCSALERAQKEAGVLGFGLVLWDGYRPQRAVDCFL
RWSQQPEDGRTKPRHYPNIDRAGMFEKGYVAAKSGHSRGSTVDLTLYDLATGDLAAMGGGHDLMDPVSHHGASGITRAEE
ANRLALRSVMEASGFRPYDCEWWHYTLEDEPYPETYFDFPIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 8e-63 63
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 2e-63 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_5792 YP_003116491.1 peptidase M15D vanX D-ala-D-ala dipeptidase U82965.2.orf32.gene. Protein 1e-80 82
Caci_5792 YP_003116491.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF155139.2.orf6.gene Protein 7e-65 67
Caci_5792 YP_003116491.1 peptidase M15D vanX D-ala-D-ala dipeptidase U35369.1.gene7.p01 Protein 1e-63 63
Caci_5792 YP_003116491.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF130997.1.orf5.gene Protein 2e-63 63
Caci_5792 YP_003116491.1 peptidase M15D vanX D-ala-D-ala dipeptidase AE016830.1.gene2249. Protein 5e-64 63
Caci_5792 YP_003116491.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF310956.2.orf6.gene Protein 2e-63 63
Caci_5792 YP_003116491.1 peptidase M15D vanX D-ala-D-ala dipeptidase M97297.gene.p01 Protein 8e-62 62
Caci_5792 YP_003116491.1 peptidase M15D vanX D-ala-D-ala dipeptidase NC_014475.1.orf4.gen Protein 8e-62 62
Caci_5792 YP_003116491.1 peptidase M15D vanX D-ala-D-ala dipeptidase FJ349556.1.orf5.gene Protein 6e-61 62
Caci_5792 YP_003116491.1 peptidase M15D vanX D-ala-D-ala dipeptidase NC_005054.2598281.p0 Protein 8e-62 62