Gene Information

Name : Caci_5428 (Caci_5428)
Accession : YP_003116128.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Unknown
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 6254572 - 6255177 bp
Length : 606 bp
Strand : -
Note : PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sma:SAV_2438 two-component system response regulator

DNA sequence :
GTGGCCGACGACCAGGCGGCGGTACGCGACGGCCTGGTCGCGCTGTTGTCGGTGACGGCCGGCGTCGAGGTCGTCGGCGA
GGCCGCGAACGGCGCGGCGGCAGTCGCTGCGGCCGAGACACTGCGGCCCGACGTCGTGCTCATGGACCTGCGCATGCCCG
GTGTGGACGGCGTCGAGGCGACGCGGCGCATCGCGCAAAGCGCCCCGGATGTGCGAGTCGTGGTCCTCACCACGCATGCC
GACGACGCCTCGATTCTCAAGGCCCTGCGAGCCGGCGCCACCGGCTACCTCACCAAGGAATCCGGCCGCGCCGAGATCGC
CCGCGCCATCGAGGCCGCGGCCTCCGGACAATCGGTCCTGGACGACGGCGTCACGGCGATACTGCTCGCCGCCGCCGTGG
AGGTCCCGGCCTCGGCCGACCTCACACCGCGCGAAGCCGAGGTACTGACGCTGATCGCGCGCGGCAAGTCCAACACCGAG
ATCGCGGGGGAGCTGTTCGTCTCCGCCGCGACCGTGAAGACACATATCAACAACCTGTTCGCGAAGATCGGCGTGCGCGA
CCGGGCTCAGGCGGTGCGGTACGCGCTGCGGCGCGGGCTCGACTGA

Protein sequence :
MADDQAAVRDGLVALLSVTAGVEVVGEAANGAAAVAAAETLRPDVVLMDLRMPGVDGVEATRRIAQSAPDVRVVVLTTHA
DDASILKALRAGATGYLTKESGRAEIARAIEAAASGQSVLDDGVTAILLAAAVEVPASADLTPREAEVLTLIARGKSNTE
IAGELFVSAATVKTHINNLFAKIGVRDRAQAVRYALRRGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 1e-20 46