Gene Information

Name : Caci_5163 (Caci_5163)
Accession : YP_003115863.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2367
EC number : 3.5.2.6
Position : 5931257 - 5932225 bp
Length : 969 bp
Strand : +
Note : PFAM: beta-lactamase; KEGG: saq:Sare_1418 beta-lactamase

DNA sequence :
ATGAGGAGATTCACGGAACGGATCGTTGTCCGCACGGTTTCGGTCGCGGCTTCGCTCGCCTTGGTGGCGGCGGCGCTTGG
CGGGTGTTCTTCGGCTTCGAACGCGCCGACATCCTCGGTTCCGTCAGCTTCATCGACATCATCGACTCCGGCAGCTTCGT
CGGCAGCGAGCACGTCCGCAAGCACCGACACCGATTCGGCGGCGTTCGCGCAGATCGCGGCGCACTATCAGGCGCAGCTC
GGCGTCTACGCCGTGGACACCGGTTCGGGACGCACGGTCGGGTACCAGGCGGACCAGCGGTTCGCGTTCTGTTCGACGAT
CAAGGCTCTGGCCGCCGCCGAGCTCCTGCACCGTGACACCGATGCGCAACTCGCCCAGACCATCCACTACTCCGCCTCGG
ATCTCGTCGACTACTCCCCCGTCACCTCCCAGCACGTCAACGACGGCATGACCCTCACCGCGGTGATGACGGCGGCGATC
GAGGTCAGCGACAACACCGCGCTGAACCTCATGCTCGATCGGCTCGGCGGACCGGCGGGGTTGCAGACGGCATTGCGCGG
CATGAATGACGCGACGACCGATGCCGACCGTCCCGAGCCGGCGGTCAACTCCGCGGTGCCGGGCGACGTGCGCGACACCA
GCACACCCCGTGCCATGGCTGAGGATTTGCGCGCGTATGTACTTGGCAACGCGCTGTCCCCGCAGCGGCGTGCGTTGCTG
ACCTCGTGGCTGACGGCGAACACCACCGGCGGCCCGTACATCAGGGCTGCGGTGCCGGCGGGCTGGACGGTCGGGGACAA
GACCGGCAACGGCGACTACGGCACGCGCAACGACATCGCCGTCCTGTGGCCGCCGCACCGCGCGCCGATCGTGATCGCAG
TGCTCTCCCATCGCGACGGCAAGGACGCGACCTCCGCCGACGCCCTGATCGCCGACGCCACGAAGGTCGCCCTTCAGCAG
CTCGGGTGA

Protein sequence :
MRRFTERIVVRTVSVAASLALVAAALGGCSSASNAPTSSVPSASSTSSTPAASSAASTSASTDTDSAAFAQIAAHYQAQL
GVYAVDTGSGRTVGYQADQRFAFCSTIKALAAAELLHRDTDAQLAQTIHYSASDLVDYSPVTSQHVNDGMTLTAVMTAAI
EVSDNTALNLMLDRLGGPAGLQTALRGMNDATTDADRPEPAVNSAVPGDVRDTSTPRAMAEDLRAYVLGNALSPQRRALL
TSWLTANTTGGPYIRAAVPAGWTVGDKTGNGDYGTRNDIAVLWPPHRAPIVIAVLSHRDGKDATSADALIADATKVALQQ
LG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaCTX-M2 ACF06162.1 beta-lactamase CTX-M2 Not tested Tn5036-like Protein 1e-47 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_5163 YP_003115863.1 beta-lactamase AF367983.gene.p01 Protein 5e-64 53
Caci_5163 YP_003115863.1 beta-lactamase GQ140348.1.gene1.p01 Protein 2e-47 50
Caci_5163 YP_003115863.1 beta-lactamase EU555534.1.gene1.p01 Protein 5e-48 50
Caci_5163 YP_003115863.1 beta-lactamase EU729727.1.gene1.p1 Protein 9e-48 50
Caci_5163 YP_003115863.1 beta-lactamase AY034847.1.gene1.p01 Protein 9e-48 50
Caci_5163 YP_003115863.1 beta-lactamase HQ641421.1.gene1.p01 Protein 9e-48 50
Caci_5163 YP_003115863.1 beta-lactamase HM066995.1.gene1.p01 Protein 2e-47 50
Caci_5163 YP_003115863.1 beta-lactamase AF395881.gene.p01 Protein 1e-47 50
Caci_5163 YP_003115863.1 beta-lactamase FJ234412.1.gene1.p01 Protein 6e-48 50
Caci_5163 YP_003115863.1 beta-lactamase AF297554.1.gene1.p1 Protein 2e-47 49
Caci_5163 YP_003115863.1 beta-lactamase AF252622.2.gene2.p01 Protein 5e-50 48
Caci_5163 YP_003115863.1 beta-lactamase AY847147.1.gene1.p01 Protein 1e-49 48
Caci_5163 YP_003115863.1 beta-lactamase FJ214369.1.gene1.p1 Protein 2e-49 48
Caci_5163 YP_003115863.1 beta-lactamase FJ214367.1.gene1.p1 Protein 5e-50 48
Caci_5163 YP_003115863.1 beta-lactamase JF274246.1.gene1.p01 Protein 9e-50 48
Caci_5163 YP_003115863.1 beta-lactamase FJ214366.1.gene1.p1 Protein 7e-50 48
Caci_5163 YP_003115863.1 beta-lactamase JF274247.1.gene1.p01 Protein 2e-50 48
Caci_5163 YP_003115863.1 beta-lactamase AY847144.1.gene1.p01 Protein 5e-50 48
Caci_5163 YP_003115863.1 beta-lactamase AY847145.1.gene1.p01 Protein 8e-50 48
Caci_5163 YP_003115863.1 beta-lactamase AY847143.1.gene1.p01 Protein 5e-50 48
Caci_5163 YP_003115863.1 beta-lactamase AF325133.1.gene1.p1 Protein 5e-50 48
Caci_5163 YP_003115863.1 beta-lactamase EF581888.1.gene1.p01 Protein 4e-50 48
Caci_5163 YP_003115863.1 beta-lactamase AY847146.1.gene1.p01 Protein 9e-50 48
Caci_5163 YP_003115863.1 beta-lactamase AY822595.1.gene1.p01 Protein 8e-50 48
Caci_5163 YP_003115863.1 beta-lactamase AF252623.2.gene1.p01 Protein 1e-49 48
Caci_5163 YP_003115863.1 beta-lactamase HQ913565.1.gene1.p01 Protein 7e-50 48
Caci_5163 YP_003115863.1 beta-lactamase AY033516.1.gene2.p01 Protein 7e-50 48
Caci_5163 YP_003115863.1 beta-lactamase JF274242.1.gene1.p01 Protein 5e-50 48
Caci_5163 YP_003115863.1 beta-lactamase FJ214368.1.gene1.p1 Protein 6e-49 47
Caci_5163 YP_003115863.1 beta-lactamase HQ833652.1.gene1.p01 Protein 7e-50 47
Caci_5163 YP_003115863.1 beta-lactamase HM803271.1.gene1.p01 Protein 4e-49 47
Caci_5163 YP_003115863.1 beta-lactamase AF325134.1.gene1.p1 Protein 2e-49 47
Caci_5163 YP_003115863.1 beta-lactamase FJ907381.1.gene1.p01 Protein 9e-50 47
Caci_5163 YP_003115863.1 beta-lactamase AJ416345.gene.p01 Protein 2e-49 47
Caci_5163 YP_003115863.1 beta-lactamase JF274243.1.gene1.p01 Protein 2e-49 47
Caci_5163 YP_003115863.1 beta-lactamase AY156923.1.gene1.p01 Protein 1e-49 47
Caci_5163 YP_003115863.1 beta-lactamase EU136031.3.gene1.p3 Protein 7e-50 47
Caci_5163 YP_003115863.1 beta-lactamase HQ398215.1.gene1.p01 Protein 2e-49 47
Caci_5163 YP_003115863.1 beta-lactamase AY143430.1.gene1.p01 Protein 1e-49 47
Caci_5163 YP_003115863.1 beta-lactamase AY029068.1.gene1.p1 Protein 4e-49 47
Caci_5163 YP_003115863.1 beta-lactamase EF418608.1.gene1.p01 Protein 2e-49 47
Caci_5163 YP_003115863.1 beta-lactamase HQ166709.1.gene1.p01 Protein 4e-49 47
Caci_5163 YP_003115863.1 beta-lactamase AF174129.3.gene9.p01 Protein 2e-49 47
Caci_5163 YP_003115863.1 beta-lactamase DQ211987.1.gene1.p01 Protein 3e-49 47
Caci_5163 YP_003115863.1 beta-lactamase EU545409.1.gene1.p1 Protein 1e-48 47
Caci_5163 YP_003115863.1 beta-lactamase HM755448.1.gene1.p01 Protein 2e-49 47
Caci_5163 YP_003115863.1 beta-lactamase AM982522.2.gene1.p01 Protein 1e-46 47
Caci_5163 YP_003115863.1 beta-lactamase AF189721.1.gene1.p01 Protein 1e-47 47
Caci_5163 YP_003115863.1 beta-lactamase AY157676.1.gene1.p01 Protein 1e-46 47
Caci_5163 YP_003115863.1 beta-lactamase DQ125241.gene.p01 Protein 7e-48 47
Caci_5163 YP_003115863.1 beta-lactamase AJ005045.gene.p01 Protein 2e-47 47
Caci_5163 YP_003115863.1 beta-lactamase AJ416344.1.gene1.p01 Protein 2e-47 47
Caci_5163 YP_003115863.1 beta-lactamase Y14156.1.gene1.p01 Protein 8e-48 47
Caci_5163 YP_003115863.1 beta-lactamase HM776707.1.gene1.p1 Protein 7e-48 47
Caci_5163 YP_003115863.1 beta-lactamase X92507.1.gene1.p01 Protein 7e-48 47
Caci_5163 YP_003115863.1 beta-lactamase U95364.1.gene1.p01 Protein 5e-48 47
Caci_5163 YP_003115863.1 beta-lactamase AB284167.2.gene1.p01 Protein 6e-50 47
Caci_5163 YP_003115863.1 beta-lactamase GQ149244.1.gene1.p01 Protein 6e-48 47
Caci_5163 YP_003115863.1 beta-lactamase EF374097.1.gene1.p01 Protein 9e-48 47
Caci_5163 YP_003115863.1 beta-lactamase AY303807.gene.p01 Protein 3e-46 46
Caci_5163 YP_003115863.1 beta-lactamase HQ833651.1.gene1.p01 Protein 3e-49 46
Caci_5163 YP_003115863.1 beta-lactamase AB205197.1.gene1.p01 Protein 4e-47 46
Caci_5163 YP_003115863.1 beta-lactamase AY750914.gene.p01 Protein 3e-47 46
Caci_5163 YP_003115863.1 beta-lactamase AF518567.2.gene4.p01 Protein 2e-45 46
Caci_5163 YP_003115863.1 beta-lactamase GQ870432.1.gene1.p1 Protein 8e-46 46
Caci_5163 YP_003115863.1 beta-lactamase DQ023162.1.gene1.p1 Protein 4e-46 46
Caci_5163 YP_003115863.1 beta-lactamase FJ971899.1.gene1.p1 Protein 9e-46 46
Caci_5163 YP_003115863.1 beta-lactamase AY954516.1.gene1.p1 Protein 5e-46 46
Caci_5163 YP_003115863.1 beta-lactamase HM167760.1.gene1.p01 Protein 4e-46 46
Caci_5163 YP_003115863.1 beta-lactamase DQ102702.1.gene1.p1 Protein 4e-47 46
Caci_5163 YP_003115863.1 beta-lactamase AJ567481.1.gene1.p01 Protein 9e-48 46
Caci_5163 YP_003115863.1 beta-lactamase GQ149243.1.gene1.p01 Protein 3e-47 46
Caci_5163 YP_003115863.1 beta-lactamase GU127598.1.gene1.p1 Protein 8e-48 46
Caci_5163 YP_003115863.1 beta-lactamase DQ408762.1.gene1.p1 Protein 1e-47 46
Caci_5163 YP_003115863.1 beta-lactamase DQ328639.gene.p01 Protein 1e-47 46
Caci_5163 YP_003115863.1 beta-lactamase AF275256.gene.p01 Protein 9e-49 45
Caci_5163 YP_003115863.1 beta-lactamase Z28968.gene.p01 Protein 4e-47 45
Caci_5163 YP_003115863.1 beta-lactamase EU202673.2.gene1.p2 Protein 4e-48 45
Caci_5163 YP_003115863.1 beta-lactamase Y10278.1.gene1.p01 Protein 3e-48 45
Caci_5163 YP_003115863.1 beta-lactamase AY238472.1.gene1.p01 Protein 8e-48 45
Caci_5163 YP_003115863.1 beta-lactamase EU177100.1.gene1.p01 Protein 3e-48 45
Caci_5163 YP_003115863.1 beta-lactamase AF255298.1.gene1.p1 Protein 4e-48 45
Caci_5163 YP_003115863.1 beta-lactamase AY080894.1.gene1.p01 Protein 4e-48 45
Caci_5163 YP_003115863.1 beta-lactamase AF305837.gene.p01 Protein 5e-48 45
Caci_5163 YP_003115863.1 beta-lactamase AY598759.gene.p01 Protein 4e-48 45
Caci_5163 YP_003115863.1 beta-lactamase AY005110.1.gene1.p1 Protein 3e-46 45
Caci_5163 YP_003115863.1 beta-lactamase U50278.1.gene2.p01 Protein 7e-48 44
Caci_5163 YP_003115863.1 beta-lactamase JF966749.1.gene1.p01 Protein 6e-48 44
Caci_5163 YP_003115863.1 beta-lactamase AY267213.1.gene1.p01 Protein 1e-47 44
Caci_5163 YP_003115863.1 beta-lactamase DQ223685.1.gene1.p01 Protein 2e-47 44
Caci_5163 YP_003115863.1 beta-lactamase EF219142.1.gene1.p01 Protein 6e-48 44
Caci_5163 YP_003115863.1 beta-lactamase GQ351346.1.gene1.p01 Protein 1e-47 44
Caci_5163 YP_003115863.1 beta-lactamase EF210159.1.gene1.p01 Protein 3e-47 44
Caci_5163 YP_003115863.1 beta-lactamase AY292654.1.gene1.p1 Protein 4e-48 44
Caci_5163 YP_003115863.1 beta-lactamase AJ704396.1.gene1.p01 Protein 1e-47 44
Caci_5163 YP_003115863.1 beta-lactamase EU402393.1.gene1.p1 Protein 5e-47 44
Caci_5163 YP_003115863.1 beta-lactamase DQ268764.2.gene6.p01 Protein 6e-48 44
Caci_5163 YP_003115863.1 beta-lactamase DQ810789.1.gene1.p01 Protein 2e-47 44
Caci_5163 YP_003115863.1 beta-lactamase JN227085.1.gene1.p01 Protein 4e-47 44
Caci_5163 YP_003115863.1 beta-lactamase X92506.gene.p01 Protein 6e-48 44
Caci_5163 YP_003115863.1 beta-lactamase EF426798.1.gene1.p1 Protein 2e-47 44
Caci_5163 YP_003115863.1 beta-lactamase FJ873739.1.gene1.p01 Protein 9e-48 44
Caci_5163 YP_003115863.1 beta-lactamase DQ061159.1.gene1.p01 Protein 2e-47 44
Caci_5163 YP_003115863.1 beta-lactamase HQ398214.1.gene1.p01 Protein 3e-48 44
Caci_5163 YP_003115863.1 beta-lactamase AY995206.gene.p01 Protein 1e-47 44
Caci_5163 YP_003115863.1 beta-lactamase AY515297.1.gene1.p1 Protein 3e-47 44
Caci_5163 YP_003115863.1 beta-lactamase AM411407.1.gene1.p01 Protein 8e-48 44
Caci_5163 YP_003115863.1 beta-lactamase FJ815436.1.gene1.p01 Protein 8e-47 44
Caci_5163 YP_003115863.1 beta-lactamase AY649755.1.gene1.p01 Protein 3e-48 44
Caci_5163 YP_003115863.1 beta-lactamase AJ549244.1.gene1.p01 Protein 1e-47 44
Caci_5163 YP_003115863.1 beta-lactamase AJ557142.gene.p01 Protein 2e-47 44
Caci_5163 YP_003115863.1 beta-lactamase AF488377.1.gene1.p1 Protein 3e-47 44
Caci_5163 YP_003115863.1 beta-lactamase AB177384.1.gene1.p01 Protein 4e-48 44
Caci_5163 YP_003115863.1 beta-lactamase DQ256091.1.gene1.p1 Protein 1e-47 44
Caci_5163 YP_003115863.1 beta-lactamase AY847148.1.gene1.p01 Protein 4e-47 44
Caci_5163 YP_003115863.1 beta-lactamase DQ885477.1.gene1.p01 Protein 2e-47 44