Gene Information

Name : Caci_4716 (Caci_4716)
Accession : YP_003115418.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Unknown
Product : LacI family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1609
EC number : -
Position : 5378209 - 5379249 bp
Length : 1041 bp
Strand : -
Note : PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: scl:sce3317 HTH-type transcriptional repressor PurR

DNA sequence :
TTGACGAGGGAGCGGGTGCGCGCCGGCGAGACGGTGCGCGGCGGCGGGCGTCCAGGGCTGCGCGACGTGGCCGAGCTGGC
CGGCGTCTCGCACCAGACGGTGTCCCGGGTGTTCAAGGACCACCCGCGGGTCAGCGCCGAGACCCGGGCCAAAGTGCTGG
CCGCGGCGGCGCAGCTGGACTTCCGGCCCAACGCCATAGCGCGCGCCCTGGCCACCGGATCCTCGCGGACCATCGGCGTG
GTCAGCTTCGACACCACGCTGTTCGGCCCGGCCTCGATGGTCAGCGCGATCGAGAGCAGCGCCCGCGACGCCGACTACTT
CGTCTCGGTGGTCGGCCTGGCCTCGCCCAGCCGCCGCTCGGTGGCCGAGGCCGCCGACCGGATGCGCGGGCAGGGCGTGG
ACGGCATCATCCTGATCCCCGGGCACGTCCCGGCCGACCAGGTGGTGCGCCACCTGCCGGCGATGCTGCCGGTGGTCTCG
CTGTCCGCGGCCGAGACCGTCGCCTCGGCCTCGGTGGACCAGTACGACGGCCCGCTGGCCGCCGTCCGCCACCTGCTGGA
CCTGGGGCACCGCACGGTGCACCACGTCGCCGGTCCCGCCGACTGGCTCGACGCCCGCCAGCGCGAACAGGCCTGGCGCG
ACGCGCTGACCGCCGCCGGGGCGCCGGTCCCGGAGCCCTTGCCCGGGGACTGGAGCGCGGCCTCCGGGTACGAGCGCGGC
CAGGTGCTGGCCGCCGATCCGCGGGTGAGCGCGGTCTTCGCGGCCAACGACCACATCGCCCTCGGCGTGCTGCTGGCGCT
GCACGAAGCCCGGCGGCGGGTCCCGGAGGAGGTGAGCGTCATCGGCTTCGACGACATCCCGGAGGCGGCGTTCTTCACCC
CGCCGCTGACCACGGTGCGGCAGGACTTCTCCGCTCTCGGCCGGCGCAGCATGGCGCTGCTGCTGGACCAGATCGGCGCC
TCCGCGCCGGCGGCCTCCCCGGTCGCGGCGGTGATACCGACCGAGTTGGTCGTGCGGCGCAGCACCGCGCGGCGTGCGTG
A

Protein sequence :
MTRERVRAGETVRGGGRPGLRDVAELAGVSHQTVSRVFKDHPRVSAETRAKVLAAAAQLDFRPNAIARALATGSSRTIGV
VSFDTTLFGPASMVSAIESSARDADYFVSVVGLASPSRRSVAEAADRMRGQGVDGIILIPGHVPADQVVRHLPAMLPVVS
LSAAETVASASVDQYDGPLAAVRHLLDLGHRTVHHVAGPADWLDARQREQAWRDALTAAGAPVPEPLPGDWSAASGYERG
QVLAADPRVSAVFAANDHIALGVLLALHEARRRVPEEVSVIGFDDIPEAAFFTPPLTTVRQDFSALGRRSMALLLDQIGA
SAPAASPVAAVIPTELVVRRSTARRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0036 YP_001220775.1 LacI family transcriptional regulator Not tested chp/tomA region Protein 7e-46 42