Gene Information

Name : Caci_4305 (Caci_4305)
Accession : YP_003115010.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : nitrate/sulfonate/bicarbonate ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 4884558 - 4885379 bp
Length : 822 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: msm:MSMEG_1160 ABC-type nitrate/sulfonate/bicarbonate transporter ATPase component

DNA sequence : 
ATGCCCGGGACCAAGGCGGAGAAGATCCGCCTCGAAGCCGTCACCAAGACGTTCGAAGTACGCGACGGCGGCACGTTCAC
CGCGCTGGAAGACGTCACGCTCGACGTGGCGCCAGGGGAGTTCCTGGTCGTGGTCGGACCCAGCGGCTGCGGCAAGTCCA
CACTGCTGGATCTCGTCAGCGGCCTGACGAAGCCCACCGGCGGCCGGATCCTGCTGGACGGCGCGCCGGTGACCGGTCCC
GCGCTCGACCGCGGCATCGTCTTCCAGCAGTACGCGCTGCTGCCGTGGCGCACCGCGCTGCGCAATATCGAGTTCGCCCT
GGAAGCGCAGCCGCGCCTGGACCGGCTCAGCCGCAAGAATCGCGTCGAACGCGCTCGCGAGTACTTGGATCTGGTCGGGC
TGTCAGGGTTCGAAGACCGCTACCCGCACGAGCTCTCCGGCGGCATGCGCCAGCGCGTCGCCATCGCCCGGGCGCTGGTC
GCCGACCCGGCAGTGCTGCTGATGGACGAGCCGTTCGCGGCCCTGGACGCCCAGACCCGCGAGCAGCTCCAGGAGGAGCT
GCTGCGGATCTGGCACAAGACCGGCACGACCGTCGTCTTCATCACCCACGGCATCGACGAGGCCGTCTACCTCGGGCAGC
GGGTCGCCGTGATGACCTCGCGGCCCGGCCGGATCAAGCAGGTCGTCGAGGTGCCGCTCGGGGACCGGCAGGCCGACGAC
GACGTGCGCTCCAGCCCGGAGTTCGCCGCCCACCGCCATCAGGTGTGGAGCCTGCTGCGCGACGAGGTCACCGCTGTCAG
GGAGGTCGTTTCCGTTGGCTGA

Protein sequence : 
MPGTKAEKIRLEAVTKTFEVRDGGTFTALEDVTLDVAPGEFLVVVGPSGCGKSTLLDLVSGLTKPTGGRILLDGAPVTGP
ALDRGIVFQQYALLPWRTALRNIEFALEAQPRLDRLSRKNRVERAREYLDLVGLSGFEDRYPHELSGGMRQRVAIARALV
ADPAVLLMDEPFAALDAQTREQLQEELLRIWHKTGTTVVFITHGIDEAVYLGQRVAVMTSRPGRIKQVVEVPLGDRQADD
DVRSSPEFAAHRHQVWSLLRDEVTAVREVVSVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-45 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_4305 YP_003115010.1 nitrate/sulfonate/bicarbonate ABC transporter ATPase NC_008702.1.4606598. Protein 4e-22 41