Gene Information

Name : Caci_4299 (Caci_4299)
Accession : YP_003115004.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 4877803 - 4878828 bp
Length : 1026 bp
Strand : +
Note : PFAM: transporter permease; KEGG: saq:Sare_2743 transporter permease

DNA sequence :
ATGAGGGTTCTGCGAACCACTGCTTTGTCAGTGCGGTATCGGCCTCGGGCGCTCACCGCTTCGGTTGCCTGCCTGGTGCT
CGCTTTCGCCGCCATGGTCATCACGCTCGGCAGCGGGGACTACCGGATCCCGCCGGGTGAGGTGCTGCGCACGCTGGCTG
GTGGCGGCACGGTGGCTGACCACTTCATCGTGGTTCAGTTGCGTTTGCCGCGCGTGGTGACCGCGCTGCTGGTCGGAGGT
GCGCTGGCGCTTGCCGGAGCGGCGTTCCAGTCGCTGGTCCGCAATCCGTTGGGGAGCCCGGACATGCTCGGGTTCACCGA
GGGTGCGGCGACCGGTGCGCTGGTCGTGGTGGTGGCCGGCGGGAGCAGTCTGGCGCTCGCGGGCGGGGCGATGATCGGCG
GTGTCGCGACCGGGGTCGGGGTCTACGCGCTCGCTTGGCGTCGCGGGGTGCACGGCTATCGGCTGATCCTGACGGGCATC
GGGGTCTCGGCGATTCTGAGCGGGGTCAACGGCTATCTGATGACCAAGGCGCAGTTGATGGACGCCGCGCGGGCGATGCT
GTGGCTGACCGGGAGTCTGGACGGTCGCGGGTGGAGCGACGTCGTGCCGTTGGCGGTCGCGATGGTGGTGCTCGTGCCGG
TGGTCGTCGCCGGATGCGGCAGGGCGCTGCACATCATCGAGATGGGTGACGATGTGGCGCGGGCGCTGGGGATCTCGGTG
GAGCGCGTGCGCCTGATGACGCTGGCCGCCGCGGTCCTGCTCACCTCGTTCGCCGCGGCGGCGGCCGGGCCGGTCTCGTT
CGTCGCGCTCACGGCGCCGCAGTTGGCCCGGCGGCTGACCCGCGCGCCGGGACCCAACCTGATCCCGTCGATGCTGCTCG
GGTCGGTGCTCCTGACGTGCGCCGATCTCGTTGCCCAGCATGCGGTTCCCGGGCGGCAGCTGCCGGTCGGGGTGGTCACC
GGGGTGCTCGGCGGCGGCTATCTGATCTGGCTGCTGGCGGCCGGACGACGTGCCGGACGGATCTGA

Protein sequence :
MRVLRTTALSVRYRPRALTASVACLVLAFAAMVITLGSGDYRIPPGEVLRTLAGGGTVADHFIVVQLRLPRVVTALLVGG
ALALAGAAFQSLVRNPLGSPDMLGFTEGAATGALVVVVAGGSSLALAGGAMIGGVATGVGVYALAWRRGVHGYRLILTGI
GVSAILSGVNGYLMTKAQLMDAARAMLWLTGSLDGRGWSDVVPLAVAMVVLVPVVVAGCGRALHIIEMGDDVARALGISV
ERVRLMTLAAAVLLTSFAAAAAGPVSFVALTAPQLARRLTRAPGPNLIPSMLLGSVLLTCADLVAQHAVPGRQLPVGVVT
GVLGGGYLIWLLAAGRRAGRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 2e-19 41
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-19 41
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 6e-19 41
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_4299 YP_003115004.1 transporter permease VFG0928 Protein 6e-22 46