Gene Information

Name : Caci_3160 (Caci_3160)
Accession : YP_003113910.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Unknown
Product : transposase IS116/IS110/IS902 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 3476181 - 3477380 bp
Length : 1200 bp
Strand : +
Note : PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sco:SCO7782 IS110 transposase

DNA sequence :
GTGTACGACACCAGCGGCATCGGCGTCTTCCTCGGTTTGGACGTCGGCAAGGGCGAGCACCACGGGCACGGGCTGACCCC
GGCCGGAAAGAAGGTGTTCGACAAGCAGTTGCCGAACAGCGAGCCGAGGCTGCGGCAGGTGTTCGACAAGCTCAAGGCCA
AGTTCGGTACCGTGCTGGTGATCGTGGACCAGCCGGCGAACATCGGGGCGCTGCCGCTGACCGTGGCGCGGGACTGCGGC
TGCGAGGTCGCCTACCTGCCGGGTTTGGCGATGCGCCGGTTGGCCGACACCTACGAGGGCGAGGCCAAGACCGACGCCCG
CGACGCGTTCGTCATCGCCGACGTCGCCCGCACCAACCCGCGCACCCTGCGGCAGATCACCGTCACCGACCAGACCGAGG
CCGAGCTGGCCATGCTCGTCGGGTTCGACGACGACCTGGCTGGCGAATCCACCCGCACCTCCAACCGGCTGCGCGGCCTG
CTCGCCCAGATCCACCCGTCCCTGGAGCGCGTCCTCGGCAAGCGGATCCGCCACCCGGCCGTCCTGGAACTGCTGAGCCG
CTACGGCTCCCCGCAGCAGCTGCACCAGGCCGGAGGCGACCAGATCGCGGCGGTCCTGAAGCCGAAGGCGCCGCGGATGG
CCGCCCGCCTGGCCGCTGAGATCACCACCGCGCTGGCCGAGCAGACCGTCGTCGTGCCCGGCACCACCGCAGCCGAGGTC
ATCGTGCCCTCGCTGGCCCGGCAGCTGGCCGAGATCCTCACCCAACGCGACGCGCTGGAGGGCCGGCTGGCAGCCCTGCT
GGAGGCCCACCCTCTTCACCGACTCCTGACCTCCATGCCCGGCGTCGGGGTCAGGATCGCCGCCACAGTGCTGATCACCA
TCGGCGACGGCCGCACCTTCCCCGACGCCGACCACCTGGCCTCCTACGCCGGACTGTCCCCGGCCACCAAATCCTCCGGC
TCCTCGATCAAAGGCGAACACGCACCCAAGCGCGGAAACCGGCAGCTCAAACGGGCCATGTTCCTGTCCGCGTTCGCCGC
CCTGCACGACCCCGCCTCCCGCGACTATTACGACCGGCACCGCAACAGCGGCAAAACCCACACCCAGGCCCTGCTACGCC
TGGCCCGCCGCCGGATTACCGTCCTGTTCGCCATGCTCCGCGACGGCTGCCTCTACGAATCCCGCCCGGCATCAGCATGA

Protein sequence :
MYDTSGIGVFLGLDVGKGEHHGHGLTPAGKKVFDKQLPNSEPRLRQVFDKLKAKFGTVLVIVDQPANIGALPLTVARDCG
CEVAYLPGLAMRRLADTYEGEAKTDARDAFVIADVARTNPRTLRQITVTDQTEAELAMLVGFDDDLAGESTRTSNRLRGL
LAQIHPSLERVLGKRIRHPAVLELLSRYGSPQQLHQAGGDQIAAVLKPKAPRMAARLAAEITTALAEQTVVVPGTTAAEV
IVPSLARQLAEILTQRDALEGRLAALLEAHPLHRLLTSMPGVGVRIAATVLITIGDGRTFPDADHLASYAGLSPATKSSG
SSIKGEHAPKRGNRQLKRAMFLSAFAALHDPASRDYYDRHRNSGKTHTQALLRLARRRITVLFAMLRDGCLYESRPASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 8e-100 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_3160 YP_003113910.1 transposase IS116/IS110/IS902 family protein VFG1494 Protein 5e-100 58