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Name : Caci_0245 (Caci_0245) Accession : YP_003111039.1 Strain : Catenulispora acidiphila DSM 44928 Genome accession: NC_013131 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 274186 - 275463 bp Length : 1278 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATTGACCTGCGACTCCTGCGCACAGACCCGGAGCGTGTCCGCGCCTCGCAGCGCGCCCGAGGTGAAGATCCGGCCCT CGTCGACGCGCTGCTGTCCGCGGACGAGGCGCGCCGCGCTGCCGTCTCCCGCTTCGACACGCTGCGCAACGAGCAGAAGG TGCTCGGCAAGCAGATCCCGAAGGCCGCGGGCGAGGAGAAGGCCGCGCTGCTCGAGCAGGCCAAGAAGCTCGCCGACGGC GTGAAGGCGGCCGAGGCCGACCAGCACGAGGCCGACGACGTGCTCAAGCAGCTCCAGCTCTCGCTGTCGAACGTGGTCAT CGACGGCGTGCCCGAGGGCGGCGAGGACGACTTCGTCCTGCGCGAGACCGTCGGGACCCCGCGCGACTTCGCCGCCGACG GCTTCGAGCCGCGCGACCACGTCGAGCTGGGCAAGCTGCTCGGCGCGATCGACCTGGAGCGCGGCGTGAAGGTCGGCGGC GCGCGGCAGTACTACCTGACCGGCGTCGGCGCGCTGCTGGAGATCGCGCTGCTGAACATGGCGATGGCGCAGGCGACCAC GTACGGCTTCACCCCGATGATCACCCCGTCGCTGGTGAAGCCGGAGGCGATGGCCGGCACCGGATTCCTGGGCCAGGCCG CCGAGAACGTCTACCACCTGACCGAAGACGACATGTACCTGGTCGGCACCTCGGAGGTGCCGCTGGCGGCGTACCACATG GACGAGATCCTGGACGCCGCCAAACTGCCGCTGCGCTACGCCGGCTACTCGTCGTGCTACCGCCGCGAGGCCGGCAGCTA CGGCAAGGACACCCGCGGCATCATCCGGGTGCACCAGTTCGAGAAGGTCGAGATGTTCTCCTACGTCCTGCCCGAGGAGG CCGAGGCCGAGCACCTGCGCCTGCTGGGCTGGGAGAAGGAGTTCCTCACCGCGCTGGAGATCCCCTTCCGGGTGATCGAC GTCGCGGCCGGCGACCTGGGCAGCTCGGCGGCCCGCAAGTACGACTGCGAGGCCTGGATCCCCACTCAGGGCAAGTACCG CGAGGTCACCTCGACCTCGAACTGCACCGAGTTCCAGGCCCGCCGCCTGCAGATCCGGATGCGTGGCGCCGACGGCGTGA AGCCGCTGGCGACGCTGAACGGCACGCTGTGCGCGATGACCCGGATGATCGTGGCGATCCTGGAGAACCACCAGAACGCC GACGGCTCGGTGACGGTTCCGGCGGCGCTGCGGCCCTACCTCGGCGGACGCGAGAAGCTGGAGCCCGTCGCGGGCTGA Protein sequence : MIDLRLLRTDPERVRASQRARGEDPALVDALLSADEARRAAVSRFDTLRNEQKVLGKQIPKAAGEEKAALLEQAKKLADG VKAAEADQHEADDVLKQLQLSLSNVVIDGVPEGGEDDFVLRETVGTPRDFAADGFEPRDHVELGKLLGAIDLERGVKVGG ARQYYLTGVGALLEIALLNMAMAQATTYGFTPMITPSLVKPEAMAGTGFLGQAAENVYHLTEDDMYLVGTSEVPLAAYHM DEILDAAKLPLRYAGYSSCYRREAGSYGKDTRGIIRVHQFEKVEMFSYVLPEEAEAEHLRLLGWEKEFLTALEIPFRVID VAAGDLGSSAARKYDCEAWIPTQGKYREVTSTSNCTEFQARRLQIRMRGADGVKPLATLNGTLCAMTRMIVAILENHQNA DGSVTVPAALRPYLGGREKLEPVAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-68 | 42 |
