Gene Information

Name : Caci_0211 (Caci_0211)
Accession : YP_003111007.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 228406 - 229176 bp
Length : 771 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: saq:Sare_0222 ABC transporter

DNA sequence :
GTGACCGGCGTGAGCGGTCCGGGCGGATCGGAGGGCCGCAAGCCGGTCATCGAGCTCGCCGACATCCGCAAGACCTACGG
CATGGACGGCACCGCCGTCCATGCCCTGCGCGGCGTCACCCTGACCGTCCCGGCCGGGGACTACGTCGCGATCATGGGCG
CCTCGGGCTCGGGCAAGTCCACGATGATGAACATCATCGGCTGCCTGGACGTCCCCACCTCCGGCCGCTACCTGCTGGAC
GGCATCGAGGTCGAGCATCTGTCGGACCGCCAGCTCGCGCTGGTCCGCAACCGCAAGATCGGCTTCGTCTTCCAGTCCTT
CAACCTGCTGCCGCGCACCACCGCGCTGGACAACGTGGAGCTGCCGCTGATCTACGCCGGCGTCGGCACCGCCGAGCGGC
GCAAGCGGGCCAGGGCCGCCCTGGAGCTGGTGGGTCTCGGCGACCGGATGAACCACAAGCCGCAGGAGCTCTCCGGCGGC
CAGCAGCAGCGCGTGGCCGTGGCCCGCGCACTGGTCACCGCGCCGAGCCTGATCCTGGCCGACGAGCCCACCGGCAACCT
GGACAGCGCCTCCTCCGAGGACGTGATGGCCCTGTTCGACCGGCTGCACCAGGCCGGGCGCACCATCGTCCTGATCACCC
ACGAGCACGACATCGCCGAGCACGCCGACCGCGCGATCCGGCTGATGGACGGGCAGATCGTCTCCGATGAGCGCAACGGC
GCCCGCGGCTGGCTTTCCGCACAGCACAGTGCCAAGCACGGGAGCGCTTGA

Protein sequence :
MTGVSGPGGSEGRKPVIELADIRKTYGMDGTAVHALRGVTLTVPAGDYVAIMGASGSGKSTMMNIIGCLDVPTSGRYLLD
GIEVEHLSDRQLALVRNRKIGFVFQSFNLLPRTTALDNVELPLIYAGVGTAERRKRARAALELVGLGDRMNHKPQELSGG
QQQRVAVARALVTAPSLILADEPTGNLDSASSEDVMALFDRLHQAGRTIVLITHEHDIAEHADRAIRLMDGQIVSDERNG
ARGWLSAQHSAKHGSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_0211 YP_003111007.1 ABC transporter NC_012469.1.7686878. Protein 2e-53 55
Caci_0211 YP_003111007.1 ABC transporter NC_008702.1.4606598. Protein 1e-45 49
Caci_0211 YP_003111007.1 ABC transporter CP001581.1.gene798.p Protein 3e-42 48
Caci_0211 YP_003111007.1 ABC transporter CP001581.1.gene598.p Protein 2e-41 43