Gene Information

Name : Caci_1914 (Caci_1914)
Accession : YP_003112675.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2170253 - 2171071 bp
Length : 819 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sma:SAV_7405 ABC transporter ATP-binding protein

DNA sequence : 
ATGGAAGACGCGCTGCGTCTGGAATCGGTGAGCAAGACGTTCGGCGACCAGGTGAAGGTCGCCGCCCTGGACCAGGTCAG
CCTCGGTCTGCCCTACGGCACCTTCACCGCCGTGATGGGACCCTCCGGCTCGGGCAAGAGCACCCTGCTGAACTGCGCCT
CCGGCTTGGAGCGCCCGGACTTCGGCCGCGTCCTGATCGGCGGCCAGGAACTGGACACCTCCGACGAGACCGCCGCCACG
CGCTTCCGGCGCGGCCGCATCGGCTTCGTGTTCCAGGCCTTCAACCTGCTGCCGACGCTGACGGTCTGGCAGAACGTGCT
GCTGCCGGCGCGGATCGCCGGGACGTCGTTGAGCAGAGAGGACAAGAACCGAGCCCGCCTCCTGCTGGACCGCGTCGGCC
TCGGCGACCGGCTGAACCACCGCCCGGCCGAGCTGTCCGGCGGTCAGCAGCAGCGGGTCGCGATCGCCCGGGCCATCGTG
AACCGGCCCGCGCTGCTGTTCGCCGACGAGCCGACCGGCGCGCTGGACTCGGTGCGCGCCGCCGAGGTGCTGATGCTGAT
CGGCGAGTCGGTGCGGGAGTTCGGGCAGACCGTGGTGATGGTGACGCACGACCCGGTGGCCGCCGCCTACGCCGACCGCG
TGCTGTTCCTGGCCGACGGCCGGATCGTGGACGAGATGCGGGCGCCGCAGGCCGCGGGAGTCGCTGCGCGGATGGCCGCG
TTCCGCCCAACGGAAGCCGCCGCTCACGTCGCCGACGCCGCTCACGCCACGCACGGAACCAGCACCGCGACCTCCCGTTT
CTCCGGAAAGGCGGCGTGA

Protein sequence : 
MEDALRLESVSKTFGDQVKVAALDQVSLGLPYGTFTAVMGPSGSGKSTLLNCASGLERPDFGRVLIGGQELDTSDETAAT
RFRRGRIGFVFQAFNLLPTLTVWQNVLLPARIAGTSLSREDKNRARLLLDRVGLGDRLNHRPAELSGGQQQRVAIARAIV
NRPALLFADEPTGALDSVRAAEVLMLIGESVREFGQTVVMVTHDPVAAAYADRVLFLADGRIVDEMRAPQAAGVAARMAA
FRPTEAAAHVADAAHATHGTSTATSRFSGKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-32 46
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_1914 YP_003112675.1 ABC transporter NC_012469.1.7686878. Protein 3e-32 45
Caci_1914 YP_003112675.1 ABC transporter CP001581.1.gene798.p Protein 4e-36 45
Caci_1914 YP_003112675.1 ABC transporter NC_008702.1.4606598. Protein 3e-31 45
Caci_1914 YP_003112675.1 ABC transporter CP001581.1.gene598.p Protein 2e-35 43