Gene Information

Name : Caci_1614 (Caci_1614)
Accession : YP_003112376.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1834177 - 1834911 bp
Length : 735 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: fre:Franean1_1654 ABC transporter

DNA sequence :
ATGATTCCCAAGGATTCCGAGCCGCTCCAGACCGTGGTGCGCCTCTCAGACGTGCGCAAGGATTTCGGCGACTACTCGGC
GCTGGACGGCGTCGGGCTGGAGATCCGAGCCGGCGAGTCGGTCGCGGTGATGGGCCCGTCCGGCAGCGGCAAGTCGACCC
TGTTGAACCTGCTTTCCGGGCTGGACCGACCCTCAGCCGGCAGCGTTGTGGTCTGCGGGCAGGACCTCGGCAAGCTCACC
GAGAAGGAGCTGGCCCTGTTCCGCCGGCGCCGGATCGGGATGGTCTTCCAGTTCTTCAACCTGCTGGACGACCTCCCCGC
GCTGGACAACGTCGTCCTCGCCGGACGGCTGGTCGGACTCAAAGCCGGACCGGCGCGGCGACGAGCGATGGAGCTGCTGG
ACCAGCTCGGGATCGCCGACCGCCAGGACGTCTATCCGGCCTCGCTGTCCGGCGGCGAACGCCAACGCGTCGCGGTAGCC
AGGGCCCTGATGAACCGCCCGGCGCTGCTCCTGGCCGACGAGCCGACCGGCGCGCTCGACAGCCGCTCGGGAGATTCGGT
GGTGGAGCTGCTGACGGAGGTGAACCGGCAGGGCCAGACGCTGGTGGTGGTCACGCACGACCGCAGGCTCGCGGCACGCT
GCGCACGCCGAGTCGTCGACGTCGTGGACGGCCGGATCGCCGGCGAGCACATCGCCGAACAGGTCACTGCACACGGCAGG
GAGCAGGCGCGATGA

Protein sequence :
MIPKDSEPLQTVVRLSDVRKDFGDYSALDGVGLEIRAGESVAVMGPSGSGKSTLLNLLSGLDRPSAGSVVVCGQDLGKLT
EKELALFRRRRIGMVFQFFNLLDDLPALDNVVLAGRLVGLKAGPARRRAMELLDQLGIADRQDVYPASLSGGERQRVAVA
RALMNRPALLLADEPTGALDSRSGDSVVELLTEVNRQGQTLVVVTHDRRLAARCARRVVDVVDGRIAGEHIAEQVTAHGR
EQAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_1614 YP_003112376.1 ABC transporter NC_008702.1.4606598. Protein 9e-32 52
Caci_1614 YP_003112376.1 ABC transporter NC_012469.1.7686878. Protein 2e-37 44
Caci_1614 YP_003112376.1 ABC transporter CP001581.1.gene798.p Protein 9e-34 44
Caci_1614 YP_003112376.1 ABC transporter NC_012469.1.7685735. Protein 2e-31 43
Caci_1614 YP_003112376.1 ABC transporter CP001581.1.gene598.p Protein 7e-35 41