Gene Information

Name : Caci_1029 (Caci_1029)
Accession : YP_003111796.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1166999 - 1167829 bp
Length : 831 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sgr:SGR_3133 ABC transporter ATP- binding protein

DNA sequence :
ATGAGTAGCGCACCGACCGCGCTCGGGCGTCGCGAAGCAGGCGGCTCCGATCACGTCGTGATCGCCCTCGACGACGTCAC
CAAGTCCTATCCGGGCGGAGTCAGCGCTCTGCGAGGAGTGTCGCTTGTGGTGCGGCGCGGCGAGTTCGTCGGAGTCGTCG
GGCCTTCCGGATCCGGCAAGTCGACGCTGCTGCACATCCTCGGCACCCTCGACCGTCCGTCGTCCGGGACGGTGCGCGTG
GACGGCTGGGACATCGCCGACCTGTCGGACCGTGAGCTGTCGGCGCTGCGCGGCGCGACGATCGGTTTCGTCTTCCAGCA
GTTCCACCTCACATCCGGCCTGTCGGCTGTCGAAGCGGTCGCGGACGGCCTGCTCTACGCGGGCGTCCGCCCTGCCGAAC
GTCGGCAGCGGGCCTCGGCCGCGCTGCACCGCGTCGGCATGGCCCACCGGCTCGACCACCGGCCGCACGAACTTTCCGGC
GGCGAGCGCCAGCGGGTGGCGATCGCGCGGGCGGTCGTCGGCGACCCGGCGGTGCTGCTGGCCGACGAGCCGACCGGCAA
CCTCGATTCGGCGTCCGGCCACGCCGTCATGGCCTTGCTCCGCAGTCTCAACGCGGCCGGCACGACGATCGTGCTCATCA
CCCACGATCGAGACATCGCCGCCGGTTTGCCGCGGCGCGTGGAGATTCGGGATGGCGAGGTCGTGGCTGATTCGGCCGCC
GCCTGCGCCGCTGCCTTCGCTTCCGCCTCGGCCTCCCCCTCCGCGTCCCAGCCGACATCCCCTTCAGCCCCTTCATCCCT
TTCAGCCCCTTCAGCTGAGGTGGCGTCGTGA

Protein sequence :
MSSAPTALGRREAGGSDHVVIALDDVTKSYPGGVSALRGVSLVVRRGEFVGVVGPSGSGKSTLLHILGTLDRPSSGTVRV
DGWDIADLSDRELSALRGATIGFVFQQFHLTSGLSAVEAVADGLLYAGVRPAERRQRASAALHRVGMAHRLDHRPHELSG
GERQRVAIARAVVGDPAVLLADEPTGNLDSASGHAVMALLRSLNAAGTTIVLITHDRDIAAGLPRRVEIRDGEVVADSAA
ACAAAFASASASPSASQPTSPSAPSSLSAPSAEVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-27 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-24 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-24 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_1029 YP_003111796.1 ABC transporter NC_008702.1.4606598. Protein 5e-35 53
Caci_1029 YP_003111796.1 ABC transporter NC_012469.1.7686878. Protein 5e-41 47
Caci_1029 YP_003111796.1 ABC transporter CP001581.1.gene598.p Protein 6e-26 42