Gene Information

Name : Afer_0978 (Afer_0978)
Accession : YP_003109590.1
Strain : Acidimicrobium ferrooxidans DSM 10331
Genome accession: NC_013124
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 998345 - 999175 bp
Length : 831 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: amr:AM1_A0193 integrase, catalytic region

DNA sequence :
ATGGGGGGAAGCCCACGAGTCATCGGGGTCTCTCGCCAGGCCTACTACGCCTGGCGACACCGTCGGGACCGAGGCGAGGA
TCCCGAGCACCTGGTGCTCGCGAGCGAGCTTCGCGCCATCTGGCACGAGAGCGACGGCACCTACGGCAGCCCCCGCATCA
CCCACGAGCTGCGACGGCGCGGGTTCTGCGTGAACCACAAGCGGGTGGAACGCCTGATGCGCGAGCTCGAGATGGCAGCG
GGCCCACGCCGGCGCTTCGTAGTCACGACGAGGCGGGGAGAGGACGCAGCGCTCCCGGACCTCGTCCGTCAGGACTTCGC
TCCTGGTGAGCCGAAGCGCAGGTATGTGAGCGACATCACCTACGTCCGCACCGATGAGGGGTTCTGCTATCTCGCCACGG
TGGCAGATCTTGGCTCGAGGCGCATCGTGGGCTGGTCACTTGGGCGTCACATGCCCGATGACCTGGTGGTCGAGGCGATC
CGCGAAGCACTCGGGACTCGGGGCAGCCTGGCTGGGGCGATCTTTCACAGCGATCGCGGCAGCCAGTACCTCTCCCGGAA
GGTACGGAGCCTGCTCGCGACCCTTGGCATTCGCCAGTCGGTGGGGAGGGTCGCGACCTGCTACGACAACGCCGTGGCCG
AGTCCTTCTTCGGGAGCTTGAAGCGCGAGCTGGTGGCTCGCTACCGCTTCGCGAACCTCTCAGGGGCTCGCTCTGCCATC
GCTAGCTGGATTCACCGTTACAACACGGTCCGCCTGCACTCAAGCCTCGGGTACCTACCGCCCGTCGAGTACGAGCTCTC
CTGGGCCTGCCGGGAGGTGGCCGTGGCCTAA

Protein sequence :
MGGSPRVIGVSRQAYYAWRHRRDRGEDPEHLVLASELRAIWHESDGTYGSPRITHELRRRGFCVNHKRVERLMRELEMAA
GPRRRFVVTTRRGEDAALPDLVRQDFAPGEPKRRYVSDITYVRTDEGFCYLATVADLGSRRIVGWSLGRHMPDDLVVEAI
REALGTRGSLAGAIFHSDRGSQYLSRKVRSLLATLGIRQSVGRVATCYDNAVAESFFGSLKRELVARYRFANLSGARSAI
ASWIHRYNTVRLHSSLGYLPPVEYELSWACREVAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 7e-27 41
unnamed AAC31485.1 L0006 Not tested LEE Protein 6e-27 41