Gene Information

Name : Afer_0243 (Afer_0243)
Accession : YP_003108885.1
Strain : Acidimicrobium ferrooxidans DSM 10331
Genome accession: NC_013124
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 246195 - 247622 bp
Length : 1428 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: fre:Franean1_1770 glutamine synthetase, type I

DNA sequence : 
ATGCAACCACGCGCACCACACGAGGTGATCGCGATGGCCGAGGAGCAGGGGGTCGAGATGGTCGACCTTCGCTTCTGCGA
CCTTCCAGGAACGATGCAGCACTTTTCAGTGCCGATCCGACAGCTCACCGAGGATTCCTTCGAGGAGGGGTTCGGGTTCG
ACGGGTCCTCGATTCGTGGCTTCAAGACGATCAACGAATCGGACATGATCTTGAAGCCAGATCCCCGCTCGGCGTACCTC
GATCCGTTCCGCAAGCACCGCACGCTGGTGCTGAACTGCTTCATCTACGATCCGGTGACCGGCCAGCCCTACGATCGTGA
CCCGCGTCGCGTCGCAGCGGCTGCGGAGGAGCACCTGCGCGCGAGCGGGATCGCGGACACGGCCTACTTCGGTCCCGAGG
CCGAGTTCTTCATCTTCGACGACGTCCGCTACCACCAGGACGAGCACTCGGCATCGTACGTGGTCGACTCCATCGAGGGT
GCGTGGAACACCGACCGTAACGAGCAGGGCTCGAACCTCGGCGGCAAGATTCCCTTCAAGCGCGGCTACTTCCCCGTACC
CCCAATGGACAAGTTCCAAGACCTCCGGTCGGAGATGGTGCTCACCATGCAGGCGCTCGGCATCGAGATCGAGGTGCAGC
ACCACGAGGTCGCCACGGCAGGGCAGGCCGAGATCGACATGCGCTATGACACCCTGCTCGCCATGGCCGACAAGCTCATG
CTCTACAAGTACGTCGTGAAGTCCGTCGCCCAGCAGGGTGGCTACACCGCGACTTTCATGCCGAAGCCGCTGTTCCAGGA
CAACGGCTCGGGCATGCACACGCACCAGTCGTTGTGGCGCGACGGTGAGCCGCTCTTCTACGAGTCGGGGGGGTATGCCG
ACCTGAGCGAGCTGGCGCTCCACTACATCGGTGGCATCCTCGCGCACGCGCCGTCGATCCTCGCCTTCGCGGCGCCGACG
ACGAACTCCTACAAGCGCTTGGTACCCGGTTACGAGGCTCCGGTCAACCTGGTGTTCTCGCAGCGGAACCGTTCCGCGGC
CTGTCGCATCCCGATGTACTCGCTCTCGCCGAAGGCGAAGCGTGTCGAGTTCCGCTGCCCAGACGCGATGGCGAACCCCT
ACCTCGCGTTCTCGGCCATGCTGCTCGCGGGGCTCGATGGCATCCGCAACAAGATCGAGCCGGCCGGACCCGACGATCGC
GACCTGTTCGACTTGCCGCCGGACGAAGCCCGGGCTCTGCCGACGGTCCCGTCGTCGCTGGAGGGCTCGCTGGCTGCTCT
CGAGGCCGATCACGACTACCTGCTCGAGGGGGGTGTCTTCTCGCAGGACCTGATCGACACCTGGATCGCCTACAAGCGTG
CCGAGGAGGTCGACGCCATTCGGCTTCGCCCGCACCCCTACGAGTTCGCGCTGTACTACGACGCCTAG

Protein sequence : 
MQPRAPHEVIAMAEEQGVEMVDLRFCDLPGTMQHFSVPIRQLTEDSFEEGFGFDGSSIRGFKTINESDMILKPDPRSAYL
DPFRKHRTLVLNCFIYDPVTGQPYDRDPRRVAAAAEEHLRASGIADTAYFGPEAEFFIFDDVRYHQDEHSASYVVDSIEG
AWNTDRNEQGSNLGGKIPFKRGYFPVPPMDKFQDLRSEMVLTMQALGIEIEVQHHEVATAGQAEIDMRYDTLLAMADKLM
LYKYVVKSVAQQGGYTATFMPKPLFQDNGSGMHTHQSLWRDGEPLFYESGGYADLSELALHYIGGILAHAPSILAFAAPT
TNSYKRLVPGYEAPVNLVFSQRNRSAACRIPMYSLSPKAKRVEFRCPDAMANPYLAFSAMLLAGLDGIRNKIEPAGPDDR
DLFDLPPDEARALPTVPSSLEGSLAALEADHDYLLEGGVFSQDLIDTWIAYKRAEEVDAIRLRPHPYEFALYYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-92 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Afer_0243 YP_003108885.1 glutamine synthetase, type I VFG1399 Protein 2e-134 58