Gene Information

Name : Afer_2014 (Afer_2014)
Accession : YP_003110588.1
Strain : Acidimicrobium ferrooxidans DSM 10331
Genome accession: NC_013124
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2133070 - 2133963 bp
Length : 894 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: mva:Mvan_1111 integrase catalytic subunit

DNA sequence : 
GTGACCGAACGCCGGGCGTGCCGGGTCGTCGGCCAGCCCCGCTCGACTCAGCGCCTCAAGCCCCCCATCCCCTCCGACGA
CGAGCTGGCACTGCGGGCGTGGCTGCGTGACTTTGCCCGGCGCCGTCCGCGCTGGGGCTGGCGGCGGGCCGCCGTCGAGG
CGAAGAAGGCGGGCTGGCGGGCCAACCACAAGCGCATCCACCGCCTCTGGATCGCCGAAGGCCTGCGTGTGCCCTACAGA
AAGCGCAAGAAGCCCCTGCGGGGGATCGGCAAGCCCGTCGGGGCGATGTGCCCGATCCGGCCCAACGTGATCTGGGCCAT
GGACTTCCAGTTCGACCAGACGTCGGACGGGAGGATGCTCAAGTTCTTGAACTTCTTGAACGTCGTGGACGAGTTCACCC
GCGAAGCCCTCGCCTGTGACGTCGAGCGTTCGATCGACGCCGACGGGGTGGTCAGATGCCTGGACCGCCTGGCCGCAGGT
CGCAGCGCCCCAGTCTACGTCCGCTTCGACAACGGCCCGGAGTTCATCGCCCACGCCGTGGCTGACTGGTGCCGGTTCAA
CGGTACCGGGACCGTCTTCATCGATCCCGGCAGCCCCTGGCAGAACGCCTGGATCGAGAGCTTCAACGGCCGGATGCGCG
ACGAGCACCTCAACGGCCAGCAGTTCGACAGCCTCCTCGAAGCCCAGGTCCTAACCGAGGACTGGAGGATCGACTACAAC
ATGAACAGGCCCCACAGCGCACACGGCTGGCTCACTCCGGTCGAGTTCGTCGAGGCCTGGCTCCACCGACAAGCACATCA
ACTCGCAAAGCGGGTGGCTCAACTCTTGGGGTCCCCTCAATCCCGGTCGTCACTCAAGACCGCGACTACGACGCCGTTCC
GGGCCTCGAGGTGA

Protein sequence : 
MTERRACRVVGQPRSTQRLKPPIPSDDELALRAWLRDFARRRPRWGWRRAAVEAKKAGWRANHKRIHRLWIAEGLRVPYR
KRKKPLRGIGKPVGAMCPIRPNVIWAMDFQFDQTSDGRMLKFLNFLNVVDEFTREALACDVERSIDADGVVRCLDRLAAG
RSAPVYVRFDNGPEFIAHAVADWCRFNGTGTVFIDPGSPWQNAWIESFNGRMRDEHLNGQQFDSLLEAQVLTEDWRIDYN
MNRPHSAHGWLTPVEFVEAWLHRQAHQLAKRVAQLLGSPQSRSSLKTATTTPFRASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 7e-29 45
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-33 43
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 3e-20 41