Gene Information

Name : Afer_2008 (Afer_2008)
Accession : YP_003110583.1
Strain : Acidimicrobium ferrooxidans DSM 10331
Genome accession: NC_013124
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2127470 - 2127916 bp
Length : 447 bp
Strand : -
Note : PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: nca:Noca_1646 MerR family transcriptional regulator

DNA sequence :
ATGAGGATCGGCGAGCTCGCAGAACGAACCGGCGTGCCCTCGAAGACGCTGCGATTCTGGGAGTCGATCGGGGTCTTGGC
CGAGCCTCCTCGCGATGCGTCGGGCTACCGCGTGTACGACGATCTCGCGATCGGCCGCATCGAGTTCGTTCGTGCGGCGC
AGACGCTGGGTCTTTCGCTAGGGGAGATCCGCGAGATCCTGGCGGTGCGGGACCATGGCGAGGTTCCGTGCCGTCATGTG
GCGACGCTGCTCGAGCGTCACCGTGCGCGGGTCGAGCAACAGATCGCCGGTCTCGTGATGCTCCGTGACGAGCTGGAGAT
GGTCCTCGGGCGAGCTGCGTCCCTGCGACCGGAAGACTGCCCCGAACGCGAGGTGTGTCACCTCGTGGTCGCGCGCGCCG
TTCCGACGACCGAGGTAGACACCGCACAGAGCGCGACGACGTCCTAG

Protein sequence :
MRIGELAERTGVPSKTLRFWESIGVLAEPPRDASGYRVYDDLAIGRIEFVRAAQTLGLSLGEIREILAVRDHGEVPCRHV
ATLLERHRARVEQQIAGLVMLRDELEMVLGRAASLRPEDCPEREVCHLVVARAVPTTEVDTAQSATTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-18 41
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-18 41
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-18 41
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-18 41
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-18 41
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-18 41
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-18 41