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Name : Afer_0190 (Afer_0190) Accession : YP_003108832.1 Strain : Acidimicrobium ferrooxidans DSM 10331 Genome accession: NC_013124 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 194661 - 195977 bp Length : 1317 bp Strand : - Note : KEGG: gtn:GTNG_0013 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : ATGATCGACCTCACGGAGCTGCGCGCCCACCCCGACGACGTCGCACGGCGCCTCGCGTCCCGCGGGATCGACCCCGAGGT GGTCGCCCACCTCGCCACGATCGATCAGCAACTCCGAGCGGTGATCACCGAGCGTGACCAGCTTCGAGCCGAGCTGCGTG CCCGCTCTCGCGACATCGCCGAGGCTCGCCGCAGCGGTCGAGACGCGACCGAGCTGCAAGAGGGCGCCCGAGCGCTCGGT AATCGGCTCGACGAACTCGAGCAGCGCGTCGACACCTTGACCGGCGATCGCGACGCGATCTGGCTGACCTTGCCCAACAT CCCGAGCCCGAACGCACCCATCGGCGAGGACGAACACGACAACCGTGTGGTACGCCAATGGTCGCCGGAGACCGGCACGG TCGAGCCCGACGTCGATCTCACGTCCACCACACCCAGCCATCGTCGCGTACCGCACTTCGAGATCGGTCGCGAGCTCGGC ATTCTCGATCTCGAGCGCGCAGCGAAGCTCTCGGGATCGATGTTCGCGCTCTATCGCAACCTCGGGGCACGCCTCGTCCG CGCTCTGACGAACTTCGCGCTCGATGCCCACGCAGAGGCCTTCGAAGAGATCCATCCTCCGACGCTGGTCCGTCGCGAGA CGATGGTGGCAACGGGCCACCTCCCCAAGTTCGCCGACGACGCCTACGTGATGGAGCGCGATGATCTCTACGCGATCCCG ACGGCCGAGGTGCCGCTCACGTCGCTCTACCGCGATGAGATCCTCGACCTTGCGATGCTCCCCATGCGCCTCACCGCCGC GACCCCGTGCTATCGGCGCGAGGCAGGGTCCGCAGGGCGCGACACCAGAGGCCTGCTGCGTCTCCACGAGTTCGACAAGG TCGAGATCCTGGCACTCGTCGCACCCGAGGATGCCACGAGCATGCACCTCGAGCTGCTCGGTCGGGCAGAGGCGCTGCTC CAGCGCCTTGGCCTGATCTATCGTGTCGTCGACCTGTGCACTGGGGACCTCGGACAGTCGTCCGCCCGCACCTTCGACCT CGAGGTCTACGCGCCCGGTGTGGACGCGTGGCTCGAAGTCTCCTCGGTGTCATGGTTCAGCGACTATCAAGCGCGCCGGG CCAATGTGCGGTTCCGCCGGGAGCCGGCGGCGCGGCCAGAGTACGTGCACACCCTCAACGGCTCGGCGCTCGCGTGGCCA CGCGTCATCGCTGCCCTCCTCGAGCAAGGTCGCGAACCCGATGGGTCGATACGCCTGCCCGATGCGCTGGCCCCCTACCT CGGCACCTCGAGGCTCGAGGCACCCAAGACCGCTTGA Protein sequence : MIDLTELRAHPDDVARRLASRGIDPEVVAHLATIDQQLRAVITERDQLRAELRARSRDIAEARRSGRDATELQEGARALG NRLDELEQRVDTLTGDRDAIWLTLPNIPSPNAPIGEDEHDNRVVRQWSPETGTVEPDVDLTSTTPSHRRVPHFEIGRELG ILDLERAAKLSGSMFALYRNLGARLVRALTNFALDAHAEAFEEIHPPTLVRRETMVATGHLPKFADDAYVMERDDLYAIP TAEVPLTSLYRDEILDLAMLPMRLTAATPCYRREAGSAGRDTRGLLRLHEFDKVEILALVAPEDATSMHLELLGRAEALL QRLGLIYRVVDLCTGDLGQSSARTFDLEVYAPGVDAWLEVSSVSWFSDYQARRANVRFRREPAARPEYVHTLNGSALAWP RVIAALLEQGREPDGSIRLPDALAPYLGTSRLEAPKTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-78 | 42 |
