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Name : Afer_1857 (Afer_1857) Accession : YP_003110444.1 Strain : Acidimicrobium ferrooxidans DSM 10331 Genome accession: NC_013124 Putative virulence/resistance : Resistance Product : Arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1942381 - 1943697 bp Length : 1317 bp Strand : + Note : PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: rpa:RPA2258 arsenical pump membrane protein DNA sequence : GTGCTGAGCCTCCACGGACCCGCCCTCATCGTCACGGCCATCGCGATCTTCGTCGCGACCCTGGCCCTCGTGATCACGCA ACCCAAGGGACTGTCGATCGGCTGGTCAGCGACCGGAGGCGCGCTGCTCGCTCTCGCGCTCGGCGTCGTCCACCTCACCA ACGTCGTCACGGTTTGGGGAATCGTCTGGAACGCCACCGCGACCTTCGTCGCGTTGATCGTGATTTCTATGGTGCTCGAC AGAGTGGGGTTCTTTCGGTGGGCCGCACTCCACGTCCTGCGCGCAGCCCACGGCAGTGCCGTCCGTGCCTTCTTCTACGT GCTCATCCTTGGCGCGGTGGTCGCAGCCCTCTTTGCGAACGACGGCGCAGCGTTGATCTTGACTCCGATCGTGTACGAGC AAGTGCGTGCACTCGGGTTCGGGCCTCGTCAGGCGCTCCCGTTCGTGATGGCGGCAGGCTTCATCGCCGACACAACGAGC CTCCCGCTCATCGTGTCGAACTTGGTCAACATCGTGAGTGCCAACTACTTCCACATCGGCTTTGCTACCTACGCCAAGAC GATGGCCCCAGTCGACCTCGTGGCCTTCGTCGCGAGCACCGCGGTCCTCTACCTCTTCTATCGGCGGATGCTGCCTGGTC GTTACGATCCGAACGCGCTTGCCGCTCCCCACAGCGCCATCGCGGACCACGGCCTGTTTCGGGCCAGCTGGGTGGTGCTC GGGGTCCTGCTCGGCGGCTACTTCCTCTCGGAGCCGCTCCACTTCGTGGTGTCGATCCCCGCCGGTCTTGCGGCGATCTT CCTCCTGCTCCTCGCCTCCCGCTCTGCCGCACTCTCCTCGGCCGCCGTGCTCCGCGAAGCCCCGTGGAGGATCGTGGTGT TCTCGATCGGCATGTACCTGGTCGTCTTCGGGCTGCGCAACGCTGGTCTGACCACTTTCCTCTCCGACGCCCTCAGCGCA ACCGCTCGCGCCGGACTCGTGCCAGCGGCCCTTGCGAGTGGCTTCGGTGCTGCCGCGTTGTCTGCGGTGATGAACAACTT GCCGACCGTCCTCATCGGTGCGCTGTCGATCAACGGAGCACATCTCGCAGGACTCGCTCGGACGGCGTCGGTGTTCGGCA ACGTGGTCGGATCAGACCTCGGCCCGAAGTTCACCCCGATCGGCTCCCTCGCGACGTTGCTCTGGCTCCACGTCCTCGAG ACCAAGGGCATCAAGATCAGCTGGGGCCGCTACTTCCGCCAAGGCATCGTGCTCACCGTTCCGGTCCTTGCCATCACGCT GGCGGCCCTGGCAGGGTGGGTCGCCATTGCGCACTGA Protein sequence : MLSLHGPALIVTAIAIFVATLALVITQPKGLSIGWSATGGALLALALGVVHLTNVVTVWGIVWNATATFVALIVISMVLD RVGFFRWAALHVLRAAHGSAVRAFFYVLILGAVVAALFANDGAALILTPIVYEQVRALGFGPRQALPFVMAAGFIADTTS LPLIVSNLVNIVSANYFHIGFATYAKTMAPVDLVAFVASTAVLYLFYRRMLPGRYDPNALAAPHSAIADHGLFRASWVVL GVLLGGYFLSEPLHFVVSIPAGLAAIFLLLLASRSAALSSAAVLREAPWRIVVFSIGMYLVVFGLRNAGLTTFLSDALSA TARAGLVPAALASGFGAAALSAVMNNLPTVLIGALSINGAHLAGLARTASVFGNVVGSDLGPKFTPIGSLATLLWLHVLE TKGIKISWGRYFRQGIVLTVPVLAITLAALAGWVAIAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 3e-95 | 59 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 9e-92 | 56 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 3e-90 | 55 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-91 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Afer_1857 | YP_003110444.1 | Arsenical pump membrane protein | BAC0578 | Protein | 2e-93 | 60 |
| Afer_1857 | YP_003110444.1 | Arsenical pump membrane protein | BAC0576 | Protein | 4e-94 | 60 |
| Afer_1857 | YP_003110444.1 | Arsenical pump membrane protein | BAC0031 | Protein | 1e-93 | 59 |
| Afer_1857 | YP_003110444.1 | Arsenical pump membrane protein | BAC0577 | Protein | 3e-95 | 59 |
| Afer_1857 | YP_003110444.1 | Arsenical pump membrane protein | BAC0574 | Protein | 1e-91 | 55 |
| Afer_1857 | YP_003110444.1 | Arsenical pump membrane protein | BAC0575 | Protein | 1e-90 | 54 |
