Gene Information

Name : Afer_1751 (Afer_1751)
Accession : YP_003110340.1
Strain : Acidimicrobium ferrooxidans DSM 10331
Genome accession: NC_013124
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1839129 - 1839845 bp
Length : 717 bp
Strand : -
Note : KEGG: hha:Hhal_0973 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
GTGGAACGACGGCCAGTGGGGCGCGGGGCAGCCGAGCTGCGGCCGGTGGCGATCACACCTGACTTCACCGAGATGGCGCC
TGGATCGGTCCTCATGCGTATGGGTCGTACCGCGGTGCTCTGTACCGTCTCGCTCGAGGAGCGCGTGCCGGCCTGGCTTC
GGGGGCAGGGCCGGGGATGGGTGAGTGCCGAGTATGCGCTCCTACCGGGGTCGACGCCGACACGGACGGCCCGTGAGGCC
GTGCGCGGGCGCCAGCAGGGGCGCACCGTGGAGATCCAGCGGCTCATCGGCCGAGCGTTGCGCAGCGTGGTCGACCTCGA
GCGCCTCGGGGAGCATCAGCTCGTCGTCGACTGCGACGTCCTCCAGGCCGACGGAGGCACGAGGACGGCCGCGATCACCG
GGGGCTTCTTGGCGCTCGAGCGCGCGCTCGAGCGCCTCGCCGAGGGCGGTCTCGTGCAGCCAGCTGCGCTCACCGGTCGT
CTTGCGGCCGTGTCCGTCGGCGTCGTCGACGGGGAGCCGCTCCTCGATCTCGACTACGACGAGGACTCGCGCGCCGACGT
CGACATGAACGTGGTGATGACCGACGGCGGTCGCTACGTCGAGGTCCAAGGTGCAGCGGAGGGGGCGCCCTTTGCGAAGG
CGACCCTCGTCGAGCTCCTCAAGCTGGCGGAGCGCGGCATCGGCGAGCTCCTCGAGCGAGGACCCCAGCTCGCGTGA

Protein sequence :
MERRPVGRGAAELRPVAITPDFTEMAPGSVLMRMGRTAVLCTVSLEERVPAWLRGQGRGWVSAEYALLPGSTPTRTAREA
VRGRQQGRTVEIQRLIGRALRSVVDLERLGEHQLVVDCDVLQADGGTRTAAITGGFLALERALERLAEGGLVQPAALTGR
LAAVSVGVVDGEPLLDLDYDEDSRADVDMNVVMTDGGRYVEVQGAAEGAPFAKATLVELLKLAERGIGELLERGPQLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-52 56