|
Name : Afer_1516 (Afer_1516) Accession : YP_003110112.1 Strain : Acidimicrobium ferrooxidans DSM 10331 Genome accession: NC_013124 Putative virulence/resistance : Resistance Product : DEAD/DEAH box helicase domain-containing protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1580849 - 1583011 bp Length : 2163 bp Strand : - Note : PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicases ; helicase domain protein; KEGG: rca:Rcas_0601 ATP-dependent DNA helicase RecG DNA sequence : ATGAGTGGCGTCGGACTCGAGGATCTCGCAGCGACGGCGCTTGCGGACCTTGCGTGGCTGTCACCGAAGGTCGTGAAGGG TCTCGAGGCGCTCGACGTCGTGACGGCCTACGACCTTGTGACCTACTATCCCCGGCGCTACGTCGATCGCACCCGCCACG TCATGATCGCCGACGCGGTTCCGGGCGAAGAGGTCGTGCTGATCGGACGCATCGCCAGCGTCCGTGTCGTGCCGACGCGC AAGCGCTCCATGACGCTGGTGGAGGCGCGGCTGGTCGACGAGACGGGGTCGGTCGGGCTGCGCTTCTTCCGCCAGCCGTG GCGTGCGAAGCAGCTCGGACGGCTCCACGGCGACATCGCCGTGTTCGGCAAGGTCGAACTCTTTCGCAAGGAGCGTCAGC TCGTCAACCCGCTCGTCGACCCCATCGGCGACCGTACGGGTCGGATCGTGCCGCTCTATCCGCTGCGCGACGGGGCCGGG ATCGACTCTGGTGCCATCGCGAGTGCGGTTCTCGGACTCCTCGAGCGCTTCTCCCCGATCGCGGAGACGATCCCGAGGGC GGTGCGAGATGCGCTGGGTCTGCTCGGGCGCGAGGAAGCGCTCCGCGCCATCCATGCGCCGGCCACGCTCGAGCAGCGAC TCGAAGCTCGACGCCGCATCGCCTTCGAGGAACTCTTTCGCATCCAGGTCATGCTCGGTCTCGTACGACGGGAGCGCGAT GCTCACCAGCGTGGCTTCGCCCACGACGTTGCTCCGTTCGGGCCTGGGACCGGTCGGCGCGTGGCAGAACTGCTCGCCCG ACTCCCGTTCTCACTCACGGCTGCCCAGCGCCGAGTGGTCACCGATATCGCCGGTGACATGCAGCGGGACCGGCCCATGC ATCGGCTCCTCCAGGGCGACGTCGGAGCCGGCAAGACGCTCGTCGCGCTGATTGCTGCGCTGTTCGCGATCCAAGGCGGC CATCAAGCCGCGTTGCTCGCGCCCACAGAGGTGCTCGCTGAACAGCACTTCCGCACGATCCTGTCGCTGCTTGGCACTGC TCGTGAGGCTCGGGAGCGCACACCGGGCCTCTTCGATGACGAGGTAGCGCCGATCGAGGTCGCCCTCCTCACGGGGACTG TGGCCTCGAAGCGCCGAGCCGACATCGTCGAGGGGTTGGCCCGCGGAACGATCGATCTGGTCGTCGGGACCCATGCCCTG CTCACCGAGGGAGTCAACCTCGCTTCGCTTGGGCTCGTCGTGGTCGACGAGCAGCATCGCTTCGGCGTGGAGCAGCGTTC GTTGTTGCGCGATCGTCATGCGGAGATCGCCGGGCGTGTGGCGGACACGCTCGTCATGACAGCCACACCGATACCTCGAA CTGCGGCGATGACGGTCTACGGCGATCTCGACCTCTCCGTGATCGACGAACTCCCACCGGGGCGGACGCCGATCCGCACG AAGTGGCTGCGTGAACGGAGCGCCTACGTCGAGGCCTTCGACTACCTGCGGGCAGAGGTCGGCCGAGGTCGGCAGGGTTA CGTCGTCTGCGCTCTCGTCGAAGAGAGCGAACGGCTCCAGGCGCGCTCGGCCGAGGAAGAGTTCGCCAGGCTCGGCAACT CGGAGCTCGCCGGACTCCGGCTCGGACTGCTCCATGGCCGCATGCCGGCGCGCGAGAAGGACCGGCAGATGGCGGCGTTT CGAGCGGGCATCATCGACGTGCTCGTCGCGACGACCGTGATCGAGGTCGGCGTGGACGTGCCAAACGCGACCGTGATGAT CATCGAAGACGCCGACCGCTTCGGCATCGCCCAGCTGCATCAGCTGCGCGGTCGGGTGGGCCGTGGCGAGCACGCGTCGG CGTGCTTCCTTCTCGCCGAGACCGACCAGGGCCCGACGGCGGCGCGCCTGGAGGCTCTCGAACGTACGACGGACGGCTTC GAGCTCGCCGAGGTCGACCTCGTGCTGCGCGGCGAGGGCACGGTCCTCGGTGCGCGTCAATCGGGCAGGAGCGACCTCAA GCTCGCCTCGGTCGTGCGCGATCGCCCCTTGGTCGAGGCGGCACGCCACCACGCCACCCGATTGCTCGAGGTCGACCCGA GCCTCCGCGAGCATCCGAGGCTCGCGCGGGAACTCGCACTGGTCGCCGACCCCGACCAGCTGGCATACCTGCTCCGGAGC TAG Protein sequence : MSGVGLEDLAATALADLAWLSPKVVKGLEALDVVTAYDLVTYYPRRYVDRTRHVMIADAVPGEEVVLIGRIASVRVVPTR KRSMTLVEARLVDETGSVGLRFFRQPWRAKQLGRLHGDIAVFGKVELFRKERQLVNPLVDPIGDRTGRIVPLYPLRDGAG IDSGAIASAVLGLLERFSPIAETIPRAVRDALGLLGREEALRAIHAPATLEQRLEARRRIAFEELFRIQVMLGLVRRERD AHQRGFAHDVAPFGPGTGRRVAELLARLPFSLTAAQRRVVTDIAGDMQRDRPMHRLLQGDVGAGKTLVALIAALFAIQGG HQAALLAPTEVLAEQHFRTILSLLGTAREARERTPGLFDDEVAPIEVALLTGTVASKRRADIVEGLARGTIDLVVGTHAL LTEGVNLASLGLVVVDEQHRFGVEQRSLLRDRHAEIAGRVADTLVMTATPIPRTAAMTVYGDLDLSVIDELPPGRTPIRT KWLRERSAYVEAFDYLRAEVGRGRQGYVVCALVEESERLQARSAEEEFARLGNSELAGLRLGLLHGRMPAREKDRQMAAF RAGIIDVLVATTVIEVGVDVPNATVMIIEDADRFGIAQLHQLRGRVGRGEHASACFLLAETDQGPTAARLEALERTTDGF ELAEVDLVLRGEGTVLGARQSGRSDLKLASVVRDRPLVEAARHHATRLLEVDPSLREHPRLARELALVADPDQLAYLLRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-80 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Afer_1516 | YP_003110112.1 | DEAD/DEAH box helicase domain-containing protein | BAC0356 | Protein | 1e-82 | 42 |
