Gene Information

Name : Afer_1177 (Afer_1177)
Accession : YP_003109782.1
Strain : Acidimicrobium ferrooxidans DSM 10331
Genome accession: NC_013124
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 1227861 - 1229918 bp
Length : 2058 bp
Strand : -
Note : TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: fra:Francci3_3286 potassium-transporting ATPase s

DNA sequence :
ATGACCGCACCCACTCGTCCATCCGCCACGCCCGTACGTGGGGTCGCCAGTTCGCGCTCGCTGACCGACCGCACGATTCT
ACGCGTCGCCCTGCGGGGGTCGCTGACGAAGCTCGATCCCCGTGTGCAAGTGCGCAATCCCGTCATGTTCGTCGTCTACC
TCGGCACCATCGTGACGGCGATCGCCTCCATCGTGCATCCATCGCTGTTCTCGTGGCTGGTGACGGTGTGGCTCGCCTTC
ACCGTGCTCTTCGCCAACTTCGCCGAGGCGATGGCGGAGGGGCGGGGCAAGGCGCAAGCAGACGCCCTGCGCCGCACCCG
TACGCAGACCGAAGCTCGTCGTCTGCGTGACGACGGAACCGAGGAGCGGGTGCCGGCGACGCAGCTCGTCGCGGGCCAAC
TCGTGGTCTGCGAGGCTGGTGACGTCATCCCTGCCGATGGCGAGATCACCGAGGGTGTCGCCTCGGTGGATGAGTCGGCC
ATCACCGGCGAGTCTGCACCCGTCATTCGAGAAGCGGGTGGTGACCGATCGTCCGTCACCGGTGGCACACGCGTGCTCTC
AGACCGCATCGTCGTTCGGGTCACCGCGGGTGCTGGGGAGAGCTTCCTCGATCGCATGATTGCCCTCGTCGAGGGTGCCG
ATCGACGACGAACGCCCAACGAGGTAGCGCTCTCGATCTTGCTCGTCGCCCTCACGGTGATCTTCGTGCCGGTCGTGGTC
GTCCTCGAGCCCTATGCCCACTATGCGCACGTCGGCATCCCGATCGTCGATCTCGTGGCGCTGCTCGTGTGCTTGATCCC
GACCACCATCGGCGCTCTCCTGTCGGCGATCGGGATCGCTGGCATGGACCGGATGGTCCAGCGCAACGTGCTCGCGATGT
CGGGTCGTGCCGTAGAGGCCGCTGGCGATGTCTCGACGCTGCTGCTCGACAAGACCGGAACCATCACCTTTGGCAATCGC
ATGGCGTCACGGTTCATCGGGATCGGCGGTGTGGCCGATGGCGACGTCGCTGCCGCAGGGCGCCTGGCGTCACTCGCCGA
CGAGACCCCGGAGGGTCGCTCCATCGTCAAGCTCGCCAAGGACGCCTACGGTCTTCGTGATCCCGTCGACCCGGCGTCGC
TGCGGTTCGTGCCGTTCACGGCGACCACGCGCATGTCGGGCGTCGACACCGACGAGGGCTCGATACGCAAGGGTGCGACC
GAGGCGGTCAAGGAATGGGTCCGTCAACAGGGTGGCGTGATCCCAGTCGAACTCGATGAGCTGTCGGCGTCGATCGCGCG
CGAGGGAGCAACGCCGCTCGCCGTCGCAGCTGGCGATCGCGTGCTCGGGCTGATCGAGTTGCGCGACGTGGTCAAGGCCG
GGATTCGTGAGCGCTTCGAACAGCTGCGCGCGATGGGTATCCGTACGGTGATGATCACGGGTGACAATCCGCTCACCGCC
TCGGCGATCGCGGCCGAGGCGGGTGTGGATGATTTCTTGGCCGAGGCCACACCCGAGCGCAAACTTGAGCTCATCCGCGA
GGAACAGGCGGACGGCAAGCTCGTCGCCATGACGGGTGACGGGACCAACGACGCCCCGGCCCTGGCACAAGCCGACGTGG
GCGTCGCGATGAACTCCGGCACGGTGGCTGCGAAGGAGGCCGCCAACATGATCGACCTCGACTCGAGCCCGACCAAGCTC
ATCGACATCGTCGAGGTGGGCAAGCAGATCCTCATCACCCGCGGTGCGCTGACGACCTTCTCGATCGCGAACGATCTGGC
CAAGTACTTCGCGATCATTCCGGCGCTCTTCGTCACGGCCTATCCGGGTCTCTCGGTCCTCAACATCATGCACCTACACT
CGCCGGAGAGTGCGATCCTGTCTGCCGTGATCTTCAACGCGCTCGTCATCGTGGCGCTCATTCCGCTGGCCCTGCGAGGG
GTGCGCTTTCGACCGTCGTCGGCGAGGTCGATCATTCGGCGCAACGTGTTCATCTATGGGATCGGAGGCGTGATCGTGCC
CTTCATCGGCATCAAGCTGATCGACCTTGTGCTCGCCGCGACGAGGGCGTTCTCATGA

Protein sequence :
MTAPTRPSATPVRGVASSRSLTDRTILRVALRGSLTKLDPRVQVRNPVMFVVYLGTIVTAIASIVHPSLFSWLVTVWLAF
TVLFANFAEAMAEGRGKAQADALRRTRTQTEARRLRDDGTEERVPATQLVAGQLVVCEAGDVIPADGEITEGVASVDESA
ITGESAPVIREAGGDRSSVTGGTRVLSDRIVVRVTAGAGESFLDRMIALVEGADRRRTPNEVALSILLVALTVIFVPVVV
VLEPYAHYAHVGIPIVDLVALLVCLIPTTIGALLSAIGIAGMDRMVQRNVLAMSGRAVEAAGDVSTLLLDKTGTITFGNR
MASRFIGIGGVADGDVAAAGRLASLADETPEGRSIVKLAKDAYGLRDPVDPASLRFVPFTATTRMSGVDTDEGSIRKGAT
EAVKEWVRQQGGVIPVELDELSASIAREGATPLAVAAGDRVLGLIELRDVVKAGIRERFEQLRAMGIRTVMITGDNPLTA
SAIAAEAGVDDFLAEATPERKLELIREEQADGKLVAMTGDGTNDAPALAQADVGVAMNSGTVAAKEAANMIDLDSSPTKL
IDIVEVGKQILITRGALTTFSIANDLAKYFAIIPALFVTAYPGLSVLNIMHLHSPESAILSAVIFNALVIVALIPLALRG
VRFRPSSARSIIRRNVFIYGIGGVIVPFIGIKLIDLVLAATRAFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-157 59
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-157 59
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-145 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-145 56
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 7e-146 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-145 56
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-145 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-145 56