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Name : gabD (BMI_I1662) Accession : YP_003107564.1 Strain : Genome accession: NC_013119 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1600120 - 1601571 bp Length : 1452 bp Strand : + Note : - DNA sequence : ATGCTTGCTTTGAAAGACCCTTCGCTCCTTAAATCGCAATGCCTCGTGAACGGTCGCTGGATCGACGCCGCAGATGGCAC GACGATCAAAGTGACAAACCCGGCTGACGGCTCCGTCATCGGCACGGTTCCCTCCCTGTCTGTTGCTACGATCAAGGAAG CCATCGACGCCTCTGCCAAGGCGCTTTCCGGTTGGGCGGCGAAAACAGCCAAGGAACGCGCGGGCATTCTGCGCAAATGG TTCGACCTTATCATCGCCAATGCCGACGATATCGCTCTTATAATGACGTCGGAGCAGGGAAAACCGCTTGCGGAAGCCCG CGGCGAGGTTCTTTATGCGGCATCCTTCATTGAGTGGTTCGCGGAAGAAGCAAAGCGTGTCTATGGCGACACGATCCCTG CACCGCAGAACGGCCAGCGCCTGACCGTCATCCGCCAGCCTGTCGGTGTCACGGCGGCGATTACGCCGTGGAATTTCCCG GCGGCAATGATTACCCGCAAGGCTGCTCCGGCGCTTGCAGCAGGCTGCACCATGATCGTGCGCCCCGCCGACCTCACCCC GCTGACCGCACTGGCGCTTGGTGTTCTGGCCGAAAAGGCAGGCATTCCGGCTGGCGTGTTGCAGATCGTGACTGGCAAGG CCCGCGAAATCGGCGCGGAACTCACCAGCAATGACACCGTGCGCAAACTTTCCTTCACCGGATCGACGGAAGTGGGGCGC CTTCTGATGGCGCAGTGCGCCCCGACCATCAAGCGCATCTCGCTGGAGCTTGGCGGCAACGCGCCCTTCATCGTGTTCGA CGATGCCGATCTTGATGCCGCCGTGGATGGCGCGATGGTTTCCAAATATCGCAATGCGGGCCAGACCTGCGTTTGCGCCA ACCGCATTTATGTACAGCGCGGCGTTTACGACAAGTTCGCCGAAAAGCTTGCGGCCAAGGTCAAGGAACTGAAGGTCGGC AACGGCACGGAACCCGGCGTCGTCATCGGCCCGATGATCGAAGAAAAAGCCATCACCAAGGTGAAGGCGCATATTGAAGA CGCGGTTTCCAAGGGCGCAAAGCTCATCACAGGCGGCAAGGAACTCGGCGGCCTGTTCTTCGAGCCGGGCATCCTGACCG GCGTGACCTCCGATATGCTGGTCGCCAAGGAAGAAACCTTCGGCCCACTCGCTCCGCTTTTTGCCTTCGACACGGAAGAA GAAGTCATTGCCCAGGCCAATGACACGATCTTCGGTCTTGCCGCTTATTTCTATACGGAAAATTTCAGCCGTGCGATCCG GGTCAGCGAAGCGCTGGAATATGGCATGGTCGGCCACAATACCGGCCTCATCTCCAATGAAGTCGCACCCTTTGGCGGCG TAAAGCAGTCTGGCCTCGGCCGCGAAGGCTCCAAATATGGTATCGAGAAATATCTCGAAACCAAATATATCTGTAGCGCC TATAAGCGGTGA Protein sequence : MLALKDPSLLKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKW FDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFP AAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGR LLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVG NGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEE EVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEKYLETKYICSA YKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-130 | 62 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 4e-75 | 44 |
