Gene Information

Name : Amir_0925 (Amir_0925)
Accession : YP_003098731.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1027480 - 1028904 bp
Length : 1425 bp
Strand : -
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: gur:Gura_2228 glutamine synthetase, type I

DNA sequence :
GTGTTCAAGAATCCCGACGAGGTCCTGAAGTTCATCTCCGACGAGGGCGTGAAGTTCGTCGACGTCCGCTTCAGCGACCT
GCCCGGCGTGATGCAGCACTTCACCCTGCCCGCGAAGGCGTTCGACGCCGACGCGATCAGCGAGGGCCTGGCGTTCGACG
GCTCGTCGGTGCGGGGCTTCCAGTCCATCCACGAGTCGGACATGCTGCTGCTGCCCGACCTGTTCACGGCGCGCCTCGAC
CCGTTCCGGATCGAGAAGACGCTGATCGTGAACTTCTTCGTGCACGACCCGTTCACCCGCGAGGCGTACAGCCGGGACCC
GCGCAACATCGCGCGCAAGGCCGAGCAGTACATCGCCGAGTCGGGCATCGCGGACACCGCGTACTTCGGCGCGGAGGCGG
AGTTCTACATCTTCGACTCCGTCCGCTTCGACACCACCGCGAACGCCTCCTTCCACGAGATCGACGCGATCTCCGGCTGG
TGGAACACCGGCCGCGAGGAGGAGGGCGGCAACCGCGGCTACAAGGTCAAGTACAAGGGCGGCTACTTCCCGGTCTCGCC
CAACGACCACTACGCCGACCTGCGCGACAAGATGGTCCTCAACATGGAGGACCAGGGCTTCGTCGTCGAGCGGGCGCACC
ACGAGGTGGGCACCGGCGGCCAGGCCGAGATCAACTACAAGTTCAACACGCTGCTGCACGCGGCCGACGACCTGATGCTG
TTCAAGTACATCATCAAGAACACCGCGTGGCAGGCGGGCAAGACCGTCACCTTCATGCCGAAGCCGCTGTTCGGCGACAA
CGGCTCGGGGATGCACACCCACCAGTCGCTGTGGAAGGACGGCCAGCCGCTGTTCCACGACGAGTCCGGTTACGCGGGCC
TGTCGGACACGGCGCGCCACTACATCGGCGGCATCCTGCACCACGCCTCGTCGCTGCTGGCGTTCACCAACCCGACGGTG
AACTCGTACCACCGCCTGGTGCCCGGCTACGAGGCCCCGGTCAGCCTGGTCTACTCCCAGCGCAACCGGTCGGCGTGCGT
GCGCATCCCGATCACCGGCGACAACCCGAAGGCCAAGCGCATCGAGTTCCGCTGCCCCGACTCGTCGGGCAACCCGTACC
TGGCCTTCTCGGCCATGGTGATGGCGGGCCTGGACGGCGTGAAGAACAAGATCGAGCCCCCGGCCCCGATCGACAAGGAC
CTCTACGAGCTGCCCCCCGAGGAGGCTCGCGACGTCAAGCAGGTCCCGGCGACGCTGGACGCGGTGCTGGACAGCCTGGA
GGCGGACCACGAGTTCCTGCTGGAGGGCGGCGTGTTCACGCCGGACGTGATCGACACCTGGATCGCGTTCAAGCGCGAGA
ACGAGATCGACCCGCTGCGCCTGCGGCCGAACCCGTACGAGTTCGCGCTGTACTACGACGTGTGA

Protein sequence :
MFKNPDEVLKFISDEGVKFVDVRFSDLPGVMQHFTLPAKAFDADAISEGLAFDGSSVRGFQSIHESDMLLLPDLFTARLD
PFRIEKTLIVNFFVHDPFTREAYSRDPRNIARKAEQYIAESGIADTAYFGAEAEFYIFDSVRFDTTANASFHEIDAISGW
WNTGREEEGGNRGYKVKYKGGYFPVSPNDHYADLRDKMVLNMEDQGFVVERAHHEVGTGGQAEINYKFNTLLHAADDLML
FKYIIKNTAWQAGKTVTFMPKPLFGDNGSGMHTHQSLWKDGQPLFHDESGYAGLSDTARHYIGGILHHASSLLAFTNPTV
NSYHRLVPGYEAPVSLVYSQRNRSACVRIPITGDNPKAKRIEFRCPDSSGNPYLAFSAMVMAGLDGVKNKIEPPAPIDKD
LYELPPEEARDVKQVPATLDAVLDSLEADHEFLLEGGVFTPDVIDTWIAFKRENEIDPLRLRPNPYEFALYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-86 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_0925 YP_003098731.1 glutamine synthetase VFG1399 Protein 7e-177 76