Gene Information

Name : Amir_0071 (Amir_0071)
Accession : YP_003097891.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 79962 - 81548 bp
Length : 1587 bp
Strand : +
Note : TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bca:BCE_1726 sodium/solute symporter family protein

DNA sequence :
GTGAACACCAACGCCGTCCTGAACATCGGCATCTTCGGGCTCTTCGTCGCGGCGACCCTGGTCGTGGTCATCCGGGCCAG
CCGCAACACCAAGACCGCGGCGGACTACCTGGCGGCGGGCCGCGCGTTCACCGGCCCGCAGAACGGCATCGCCATCGCGG
GCGACTACCTGTCCGCCGCGTCGTTCCTGGGCATCGCGGGCGCCATCGCGGTCTACGGGTACGACGGCTTCCTGTACTCC
ATCGGGTTCCTGGTGGCCTGGCTGGTGGCGCTGCTGCTGGTCGCGGAGCTGCTGCGCAACACCGGCAAGTACACGATGGG
CGACGTGCTGAGCTTCCGGATGCGCCAGCGCCCGGTCCGCGCGGCGGCGGCCACGTCGACCATGGTCGTGTCGTTCTTCT
ACCTGCTGGCGCAGATGGCGGGCGCGGGCGGCCTGGTGGCGCTGCTGCTCGGCATCACCGGCAAGGGCGGCCAGGCGATC
GTGATCGCGGTGGTCGGCGCGCTGATGATCGCGTACGTGCTGATCGGCGGCATGAAGGGCACCACCTGGGTGCAGATCAT
CAAGGCCGTGCTGCTGATCGTCGGCGCGGGCGTGATGACGATCTGGGTGCTGGCGAAGTACGGGTTCAACCTGTCCACGC
TGCTCGGCGCGGCGGTCGACAACGCGCCGAAGGCGGGGGAGAAGCTGCTCGGGCCGGGCCTGCAGTACGGGGCCACCGGC
ACGACGAAGCTGGACTTCCTCTCGCTCGGCCTCGCGCTGGTGCTCGGCACCGCGGGCCTGCCGCACATCCTGATGCGCTT
CTACACGGTGCCCACCGCGAAGGAAGCGCGCCGGTCCGTGGTGTGGGCGATCTGGCTGATCGGCCTGTTCTACCTGTTCA
CCCTGGTCCTGGGCTACGGCGCGGCGGCCCTGGTCGGCCCCGACAAGATCAACGCGGCACCGGGCAAGGCGAACTCGGCG
GCCCCGCTGCTGGCCGAGGCGATCGGCGGCCCGCTGCTGCTGGGCCTGATCGCGGCGGTCGCGTTCGCGACGATCCTCGC
GGTCGTCGCCGGGCTGACCATCACCGCGTCGGCGTCGTTCGCGCACGACATCTACGCCAACGTGATCAAGAAGGGCGAGG
TGGAGGACAAGGACGCGGAGGTGAGGGTGGCGCGGCGGACGGCCATCGTCATCGGCGTCGTGTCCATCCTCGGCGGCATC
GCGGCGAACGGCCAGAACGTGGCGTTCCTGGTGGCGCTGGCGTTCGCGGTCGCGGCGTCGGCGAACCTGCCGACGATCCT
GTACTCGCTGTTCTGGAAGCGCTTCAACACGGCGGGCGCCCTGTGGAGCATCTACGGCGGCCTGTCGGTGACCCTGGTCC
TGATCGTCCTGTCGCCCGCGGTCTCCGGAAGGCCGACCTCGATGTTCCCGACGATGGACTTCGACCTGTTCCCCCTGTCG
AACCCCGGCATCATCTCGATCCCGCTGGCGTTCCTGCTGGGCTACCTGGGCACGGTCCTGTCGAAGGAGCGGAACCCGGC
GAAGTACGCCGAGATGGAGGTCCGCGCGCTGACCGGCACGGGCGCGGAGAAGGCCACCTCGCACTGA

Protein sequence :
MNTNAVLNIGIFGLFVAATLVVVIRASRNTKTAADYLAAGRAFTGPQNGIAIAGDYLSAASFLGIAGAIAVYGYDGFLYS
IGFLVAWLVALLLVAELLRNTGKYTMGDVLSFRMRQRPVRAAAATSTMVVSFFYLLAQMAGAGGLVALLLGITGKGGQAI
VIAVVGALMIAYVLIGGMKGTTWVQIIKAVLLIVGAGVMTIWVLAKYGFNLSTLLGAAVDNAPKAGEKLLGPGLQYGATG
TTKLDFLSLGLALVLGTAGLPHILMRFYTVPTAKEARRSVVWAIWLIGLFYLFTLVLGYGAAALVGPDKINAAPGKANSA
APLLAEAIGGPLLLGLIAAVAFATILAVVAGLTITASASFAHDIYANVIKKGEVEDKDAEVRVARRTAIVIGVVSILGGI
AANGQNVAFLVALAFAVAASANLPTILYSLFWKRFNTAGALWSIYGGLSVTLVLIVLSPAVSGRPTSMFPTMDFDLFPLS
NPGIISIPLAFLLGYLGTVLSKERNPAKYAEMEVRALTGTGAEKATSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 6e-94 62
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 2e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_0071 YP_003097891.1 SSS sodium solute transporter superfamily protein BAC0570 Protein 2e-44 46
Amir_0071 YP_003097891.1 SSS sodium solute transporter superfamily protein BAC0564 Protein 1e-49 44