Gene Information

Name : Amir_5675 (Amir_5675)
Accession : YP_003103336.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6691562 - 6692314 bp
Length : 753 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit

DNA sequence :
ATGTCCGCAGTCGTGTCCGACGTCGGAACCCGGACCGCCGTGGAGGCGACCGGCCTGGTCAAGGTGTACGGCAAGGGCGA
CACCGCGGTGCACGCGCTGGCCGGGGTCACCGTCGCCTTCGAGGCGGGCCGGTTCACCGCGATCATGGGCCCCTCGGGTT
CCGGCAAGTCCACCCTCATGCACTGCCTGGCGGGCCTGGACGACGTGGACGGCGGCCAGGTCCGCGTCGGCGGCACCGAG
ATCACCGGCCTGGGCGACAAGGACCTCACCAAGCTCCGCCGCGACCGGGTCGGGTTCGTCTTCCAGTCGTTCAACCTCCT
GCCGACGCTCACCGCGGAGCAGAACATCCTGCTCGGCCTTGAGCTGGCGGGCCGCAAGCCCGACCGGGAGTGGTTCGACA
CCATCGTCGAGGTGCTCGGCCTGCGCGACCGCCTCAAGCACAAGCCGACCGAGCTGTCCGGCGGCCAGCAGCAGCGCGTG
GCCTGCGCCCGCGCCCTGGTCGCCCGGCCCGACGTGGTGTTCGCCGACGAGCCCACCGGCAACCTGGACTCGCGCTCCGG
CGCCGAGGTCCTGGACTTCCTGCGCATGTCGGTCCGCAAGCTCGGCCAGACCGTGATCATGGTGACGCACGACCCGGTCG
CCGCCTCCTACGCGGACCGCGTGGTCCTGCTCGCCGACGGCCACCTCGCGGGCGACATCACCGCCCCCACCGCCGACAGC
GTCCTCGCCGCGCTCAAGAACCTGGGGGCCTGA

Protein sequence :
MSAVVSDVGTRTAVEATGLVKVYGKGDTAVHALAGVTVAFEAGRFTAIMGPSGSGKSTLMHCLAGLDDVDGGQVRVGGTE
ITGLGDKDLTKLRRDRVGFVFQSFNLLPTLTAEQNILLGLELAGRKPDREWFDTIVEVLGLRDRLKHKPTELSGGQQQRV
ACARALVARPDVVFADEPTGNLDSRSGAEVLDFLRMSVRKLGQTVIMVTHDPVAASYADRVVLLADGHLAGDITAPTADS
VLAALKNLGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-36 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-36 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_5675 YP_003103336.1 ABC transporter NC_008702.1.4606598. Protein 8e-36 46
Amir_5675 YP_003103336.1 ABC transporter CP001581.1.gene598.p Protein 3e-46 45
Amir_5675 YP_003103336.1 ABC transporter CP001581.1.gene798.p Protein 4e-42 45
Amir_5675 YP_003103336.1 ABC transporter NC_012469.1.7686878. Protein 1e-39 44