|
Name : Amir_4904 (Amir_4904) Accession : YP_003102576.1 Strain : Actinosynnema mirum DSM 43827 Genome accession: NC_013093 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1120 EC number : - Position : 5842070 - 5842849 bp Length : 780 bp Strand : - Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rsq:Rsph17025_3334 hypothetical protein DNA sequence : ATGAGCACGACGCTGCGCGCCGAGGAGCTGGTGGTGCGCTTCGGCGGCCACGCGGCCGTGGACGGGGTCGGGCTGACCGT GCCGACCGGGTCGGTGACCGCGGTCGTGGGGCCCAACGGGTGCGGCAAGTCCACCTTGCTGCGCGCCCTCTCCCGCTTGC TGCCAACGGATTCCGGCCGGGTGCTGCTGGACGGCGAGGACGTGCGCCGAACCCCGCCGCGCGCGTTCGCCCGCAAGGTC GCCCTGCTGCCGCAGGAACCGCAGGCGCCGGACGGGCTGACCGTGGTGGACCTGGTGACGCGCGGCCGCGACCCGCACCG CCGCTGGTACGACCAGTGGTCGAGGCCGGACGAGGAGATCGTGCTGGACGCGTTGCGCCGCACGGGTCTGGCGGAGCTGG CGGACCGGCCGCTGCACACCCTGTCGGGCGGGCAGCGGCAGCGGGCGTGGATCGCGCTGGCGCTGGCGCAGCGCACCGAC GTGCTGCTGCTGGACGAGCCGACGAACCACCTGGACGTGGCGCACCAGCTGGACGTGCTGGACACGGTGACCTCGTTGCG GGGCTTGACGGTGGTGATGGTCCTGCACGACCTCGGCCTGGCCGCCCGGTACGCCGAGCGCGTGGTGGCGATGCGCGACG GCCGGGTCGTGGCGTCCGGTCCGGTGGCGCGGGTGCTCACGCCGCCGCTGCTGCGGGAGGTGTTCGACGTGGAGTGCGGC GTGCTGACCGACCCGGAGACGGGGCGGCCGGTGGTGGTGCCGAGGCGGGTGGTGCGCTGA Protein sequence : MSTTLRAEELVVRFGGHAAVDGVGLTVPTGSVTAVVGPNGCGKSTLLRALSRLLPTDSGRVLLDGEDVRRTPPRAFARKV ALLPQEPQAPDGLTVVDLVTRGRDPHRRWYDQWSRPDEEIVLDALRRTGLAELADRPLHTLSGGQRQRAWIALALAQRTD VLLLDEPTNHLDVAHQLDVLDTVTSLRGLTVVMVLHDLGLAARYAERVVAMRDGRVVASGPVARVLTPPLLREVFDVECG VLTDPETGRPVVVPRRVVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iusE | YP_005143742.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 9e-58 | 52 |
| fecE | AAL08451.1 | ATP-binding protein FecE | Virulence | SRL | Protein | 2e-50 | 48 |
| DIP0585 | NP_938961.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 6e-48 | 47 |
| CDCE8392_1767 | YP_005134301.1 | iron complex transport system ATP-binding protein | Virulence | Not named | Protein | 1e-39 | 46 |
| phuC | YP_005686351.1 | Iron(III) dicitrate transport permease-like protein yusV | Virulence | PiCp 7 | Protein | 9e-37 | 45 |
| phuC | YP_005682167.1 | Iron(III) dicitrate transport permease-like protein yusV | Virulence | PiCp 7 | Protein | 5e-37 | 45 |
| phuC | YP_005684259.1 | Iron(III) dicitrate transport permease-like protein yusV | Virulence | PiCp 7 | Protein | 5e-37 | 45 |
| cpfrc_01918 | YP_003784318.1 | hypothetical protein | Not tested | PiCp 7 | Protein | 6e-37 | 45 |
| ciuD | YP_005685432.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 4e-49 | 43 |
| ciuD | YP_005681255.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 4e-49 | 43 |
| ciuD | YP_005683346.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 4e-49 | 43 |
| ciuD | YP_003783391.1 | iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 4e-49 | 43 |
| fagC | YP_005682397.1 | ATP binding cytoplasmic membrane protein | Virulence | PiCp 1 | Protein | 6e-48 | 42 |
| fagC | YP_005684488.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 6e-48 | 42 |
| fagC | YP_005680307.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 6e-48 | 42 |
| fagC | YP_003782430.1 | ABC transporter ATP-binding protein | Not tested | PiCp 1 | Protein | 6e-48 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amir_4904 | YP_003102576.1 | ABC transporter | BAC0164 | Protein | 1e-50 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amir_4904 | YP_003102576.1 | ABC transporter | VFG1042 | Protein | 1e-50 | 48 |
| Amir_4904 | YP_003102576.1 | ABC transporter | VFG0925 | Protein | 1e-56 | 45 |
