Gene Information

Name : Amir_4295 (Amir_4295)
Accession : YP_003101995.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 5057178 - 5058221 bp
Length : 1044 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: oan:Oant_2826 transport system permease protein

DNA sequence :
GTGACCACCGCGACCCACCGGTCCGACCAGGGTGCCGCCGAGAGGCGGCACCCTGCTCGTGTCCGGCTCACCTGGCTGGT
CGCGCTGGTCGTCGTCCTGGCCGCCGCCGCGCTCGCCTCGGTCGTGCTCGGCGCCCGCGACATCGGCTTCGACGACGTCG
TCGCGGGCCTCGGCGGCTCCCAGGACAACCTGGCGCAGGCCGCCGTCGCCAAGCGCGTGCCCCGCACCCTGCTCGCCGTC
GTCGTCGGCGCCGCCCTCGGCATCTCCGGCGCGGTCATGCAGGGCGTGACCCGCAACCCGTTGGCGGATCCCGGAATCCT
CGGCGTCAACTCCGGCGCCTCGCTGGCCATCGCGGTCGGCATGACCTCCTTCGGCCTGGTCAAGGCCTCCGCCCACATCT
GGGTGGCCATCTTCGGCGCGGCCGTCACCGCCGTGCTCGTCTACACGATCGGCTCCCTCGGCCGGGGCGGCCCCACGCCG
CTCAAGCTCGCGCTCGCGGGCGCCGTCTCCTCGGCCGCGCTCACCTCGCTGATCAGCGCGGTCGTGCTGTCCCGCAACGA
CATCTCCGCCACGTTCCGCTCCTGGCAGATCGGCGGCGTCGGCGGCGGCTCCTACGAGGGCATCGCCATGGTGCTGCCGT
TCCTGGTGGTCGGCCTGCTGCTGTGCCTGGCCACCGCGCGCGGCCTGAACTCCCTGGCGCTGGGCGACGACGTCGCCGCC
GGGCTCGGCGAGCGCGTGCTGCTCACCCGCACCCTCGCCTCCGTCGGCGCGGTCGTGCTGTGCGGCGCGGCCACCGCGGC
CGCGGGCCCCATCGGGTTCGTCGGCCTGGTCCTGCCGCACCTGTGCAGGCTCCTCGTGGGCCCGGACCACCGCTGGCTGC
TGCCGTTCTCCGCACTCGGCGGGGCCGCGCTGCTCACCGCCGCCGACGTCGTCGGCCGCGTGGTCACCCGGCCCGAGGAG
ATCGACGTCGGCATCATCACCGCGCTGATCGGCGCGCCGTTCTTCATCTGGATCGTCCGCCGACAGAAGGTCCGATCGCT
GTGA

Protein sequence :
MTTATHRSDQGAAERRHPARVRLTWLVALVVVLAAAALASVVLGARDIGFDDVVAGLGGSQDNLAQAAVAKRVPRTLLAV
VVGAALGISGAVMQGVTRNPLADPGILGVNSGASLAIAVGMTSFGLVKASAHIWVAIFGAAVTAVLVYTIGSLGRGGPTP
LKLALAGAVSSAALTSLISAVVLSRNDISATFRSWQIGGVGGGSYEGIAMVLPFLVVGLLLCLATARGLNSLALGDDVAA
GLGERVLLTRTLASVGAVVLCGAATAAAGPIGFVGLVLPHLCRLLVGPDHRWLLPFSALGGAALLTAADVVGRVVTRPEE
IDVGIITALIGAPFFIWIVRRQKVRSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 3e-34 44
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 3e-34 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_4295 YP_003101995.1 transport system permease VFG0926 Protein 9e-22 44