Gene Information

Name : Amir_4294 (Amir_4294)
Accession : YP_003101994.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 5056087 - 5057181 bp
Length : 1095 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: oan:Oant_2825 transport system permease protein

DNA sequence : 
GTGACCGACACCGCCACCCGTGCCGCCAACCGCGACGCGGCGCTCGGCGCCGTCGCCGCCGCCGCGCCGTCCACACTGGA
CTCGGTCACCCGCGCCCGCAAGCGCAACGCCCGCCGCAGGCGGATCGTCATCGGCGTGCTGTCCGCGCTCATCCTGGTGA
TGATCGCGGTGTCGCTGATGTTCGGCCAGCGCTACTACCCGCCGTCCGACGTGCTCGCGGTGATCCTCGGCGAGCAGGTG
CCCGGCGCCTCGTTCACCGTCGGCAGGCTCCGCCTTCCCCGCACCGTCCTGGCCACCCTGGCGGGCCTGTGCTTCGGGCT
CGGCGGCGTGTCCTTCCAGACCATGCTGCGCAACCCCCTGGCCAGCCCCGACATCATCGGCATCAGCGCGGGCGCGTCCG
CCGCCGCCGCGTTCGCGATCGTCGTGCTGGGCCTGTCCGGCGCCACCGTCGCCGCGTTCGCGATCGTCGCAGGCCTGCTC
ATCGCGCTGCTGGTGTACCTGCTGGCGTTCAAGTCCGGCGGCGCGGGCACCCGGCTGATCCTGATCGGCATCGGCACCGC
CGCCATGCTGCACAGCGCCATCAACTGGATCCTCAACAGCGCGGGCGACTGGGACCTGCAGGAAGCCCTGGTGTGGCTGA
CCGGCAGCCTCAACGGCTCGTCGTGGACCGACGTCCTGCCCGTGCTGTTCGCCTCCGTCGTGCTGGCGCCGCTGCTGCTC
GCCCAGAGCAGGCGCCTTGGCGCGATGCAGCTGGGCGAGGACGCCGCGGGCGCGCTCGGCGTGCGCGTGGAGCTGGTCCG
GCTCACCGTCGTGATCGCCTCGGTCGGCCTGATCGCCTTCGCCACCGCCGCCTGCGGCCCGATCGCGTTCGTCGCGTTCC
TGGCCGGACCCATCGCGGCCAGGCTCGTCGGCCCCGGCGGTTCGCTGCTGGTGCCCGCGATGCTCGTCGGCTCGCTGCTG
GTGCTGGTGGCCGACTACAGCGGCCAGTACCTGCTGCCCGCCCGCTACCCGGTCGGCGTCGTCACCGGCGTCCTCGGCGC
CCCCTACCTGATCTACCTCATCATCCGCACCAACCGAGCCGGAGGCTCGCTGTGA

Protein sequence : 
MTDTATRAANRDAALGAVAAAAPSTLDSVTRARKRNARRRRIVIGVLSALILVMIAVSLMFGQRYYPPSDVLAVILGEQV
PGASFTVGRLRLPRTVLATLAGLCFGLGGVSFQTMLRNPLASPDIIGISAGASAAAAFAIVVLGLSGATVAAFAIVAGLL
IALLVYLLAFKSGGAGTRLILIGIGTAAMLHSAINWILNSAGDWDLQEALVWLTGSLNGSSWTDVLPVLFASVVLAPLLL
AQSRRLGAMQLGEDAAGALGVRVELVRLTVVIASVGLIAFATAACGPIAFVAFLAGPIAARLVGPGGSLLVPAMLVGSLL
VLVADYSGQYLLPARYPVGVVTGVLGAPYLIYLIIRTNRAGGSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09550 YP_002510938.1 ferric enterobactin transport protein Virulence PPI-1 Protein 8e-40 46
SP_1034 NP_345509.1 iron ABC transporter permease Virulence PPI-1 Protein 8e-40 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_4294 YP_003101994.1 transport system permease VFG0928 Protein 6e-21 42