Gene Information

Name : Amir_4049 (Amir_4049)
Accession : YP_003101756.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4762001 - 4762753 bp
Length : 753 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit

DNA sequence : 
GTGACGCGCGGGAACGCCGCCGCGCGGGAGGAGCTGGACGGGTGGCGGTTGGCGGCCGTCGACCTGGTCAAGGTGCACCG
GCAGGGCGGAGCCGAGGTCCGGGCGCTGGACGGGGTCACGGTCTCCTTCGGGGCCGGGCGGTTCACGGCCGTCACGGGCG
CGTCCGGGTCGGGCAAGTCCACGCTGCTGCACTGCCTCGCCGGGGTGGACGTCGCGACGTCCGGCCGGGTGCTCCTGGGC
GGGCAGGAGCTGAGCGGGCTCACCGAGCGGGCGCTCACCCGCGTCCGGCGCGACCGGGTCGGGTTCGTGTTCCAGGCGTT
CAACCTGCTGCCCCAGCTGAGCGCGGAGCGGAACATCACGCTGCCGCTCGACCTGGCCGGGCGGGACGTCGACCGGGAGC
TGTTCGAGCACCTGGTGGGCGTGCTCGGTCTCGGCGACCGGCTGGGGCACCGGCCGGGTGAGCTGTCCGGTGGGCAGCAG
CAGCGGGTGGCGCTGGCGCGGGCGCTGATCGGGCGGCCCGACGTGGTGTTCGCGGACGAGCCGACCGGCAACCTGGACTC
GCGCTCCGGAGGTGAGGTGCTGGCGTTCCTGCGCGAGTCGGTGCGGGAGCTGGGGCAGACCGTGGTGATGGTGACGCACG
ACCCCGTGGCGGCCTCGTACGCGGACCGGGTCGTCGCGCTCGCGGACGGGAAAGTGGTGCGGGACCAGGACAACGCCCCG
GCACGGCGTCGGGACGGCGGGGTGGCGCGGTGA

Protein sequence : 
MTRGNAAAREELDGWRLAAVDLVKVHRQGGAEVRALDGVTVSFGAGRFTAVTGASGSGKSTLLHCLAGVDVATSGRVLLG
GQELSGLTERALTRVRRDRVGFVFQAFNLLPQLSAERNITLPLDLAGRDVDRELFEHLVGVLGLGDRLGHRPGELSGGQQ
QRVALARALIGRPDVVFADEPTGNLDSRSGGEVLAFLRESVRELGQTVVMVTHDPVAASYADRVVALADGKVVRDQDNAP
ARRRDGGVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_4049 YP_003101756.1 ABC transporter CP001581.1.gene598.p Protein 1e-42 46
Amir_4049 YP_003101756.1 ABC transporter CP001581.1.gene798.p Protein 1e-38 45
Amir_4049 YP_003101756.1 ABC transporter NC_008702.1.4606598. Protein 2e-28 44
Amir_4049 YP_003101756.1 ABC transporter NC_012469.1.7686878. Protein 3e-38 43