Gene Information

Name : Amir_0332 (Amir_0332)
Accession : YP_003098147.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 361227 - 362411 bp
Length : 1185 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: ppg:PputGB1_1806 transport system permease protein

DNA sequence : 
GTGAGCGGGGACGGCGGCGCGGCGGGGGAGGGGACCGCTGCGCACGGCGCGACTGCCACCGGCGCCACCGCGGTCGGCCT
CGCGTCCGGCGTCCCGGTCGGTGGCGACGCGCTCGCGCGCCCGACCGTGAAGGGCCGCACCGGCGTCCGCCTCGGCCCGC
TCTCCTGGCCGCTGCGCTGGCGCCCGATCGCCCTGGTCCTCGGCGGCCTCGCGCTCGCCGCGACCGTCCTCGCCGTCGCC
ATCGCCTACGGCGACTTCCCGATCAGCCTCGGCCAGGTCGTCGACGTGCTGCTCGGCGGCGGCAGCCGCAGCCAGCGGTT
CGTCGTCATGGAGCTGCGCCTGCCGCGCGTGCTCACCGGCCTGCTGGTCGGCGCCGCGCTCGCCGCCTCCGGCGCGATCT
TCCAGGCCATCTCCCGCAACCCGCTGGCCACCCCGGACATCATCGGCGTCACCTGGGGCGCGGGCACCGGCGCGGTGCTG
GTCATCGTCCTGGCGGGCAGCTCCGGCGCCGCCGCGGGCGCGGTCGCCCAGGTCGGCGTGCCGCTGGCCGCGCTCGCCGG
CGGCCTGATCGCCGGGCTGGTGGTCTACGGCATCGCCTGGCGGCGCGGCATCGAGGGCTTCCGGCTCGTCCTGGTCGGCG
TCGGCGTCACCGCGATCACCGCGAACGCCACCCAGTACCTGCTCACCAAGGCCGACGTGAACGACACCGCCCGCGCCATG
GTCTGGATCGCGGGCAGCCTCAACAACCGGGGCTGGGAGCACATCGTCCCGGTCGCGCTCGCCCTGGTCGTGCTGCTGCC
CGCCTCCGTGCTGGCCACCCGCACGCTCGGCGCGCTCCAGTTCGGCGACGACACCACCAGGGGCCTCGGCGTGCGGCTCA
ACGGCGCCCGCACCGCCCTGCTGCTGCTCGGCGTCGTGCTCGCCGCCGTGGCCACCGCCGCCGCGGGCCCCGTCGGGTTC
GTGGCGCTGGCCGCCCCGCAGATCGCCGTGCGCCTGGCGGGCACGGCGACCCCGCCGCTGTTCGGCTCGGCCGTCGTCGG
CGCCGTGCTGGTCGTGCTCTCCGACCTGATCGCCCGCCAGCTGATCGACGGCACGGAGCTGCCGGTCGGCGTGGTCACCG
CCGTGCTCGGCGCCCCGTACCTGATGCACCTGCTCATCCGCAGCCGCCGGGAGGCGAGGACATGA

Protein sequence : 
MSGDGGAAGEGTAAHGATATGATAVGLASGVPVGGDALARPTVKGRTGVRLGPLSWPLRWRPIALVLGGLALAATVLAVA
IAYGDFPISLGQVVDVLLGGGSRSQRFVVMELRLPRVLTGLLVGAALAASGAIFQAISRNPLATPDIIGVTWGAGTGAVL
VIVLAGSSGAAAGAVAQVGVPLAALAGGLIAGLVVYGIAWRRGIEGFRLVLVGVGVTAITANATQYLLTKADVNDTARAM
VWIAGSLNNRGWEHIVPVALALVVLLPASVLATRTLGALQFGDDTTRGLGVRLNGARTALLLLGVVLAAVATAAAGPVGF
VALAAPQIAVRLAGTATPPLFGSAVVGAVLVVLSDLIARQLIDGTELPVGVVTAVLGAPYLMHLLIRSRREART

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 2e-16 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_0332 YP_003098147.1 transport system permease VFG0928 Protein 3e-16 42