Name : Amir_0331 (Amir_0331) Accession : YP_003098146.1 Strain : Actinosynnema mirum DSM 43827 Genome accession: NC_013093 Putative virulence/resistance : Virulence Product : transport system permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 360226 - 361230 bp Length : 1005 bp Strand : + Note : PFAM: transport system permease protein; KEGG: pde:Pden_3523 transport system permease protein DNA sequence : GTGGTGACCGTCCGCACGACCCGCCGCTACGGCGTGCTCGCGCTGCTGCTGGGCGCGCTCGCCCTGGCCGCCGCCGCGAG CGTCGCGTTCGGCTCCAAGTCGATCGACCTCGGCTCGGTGGCGCACGCCCTGCTCAGCCCGACCGGCACCGAGGACGACT CGATCGTCCGCGAGCTGCGCCTGCCCAGGACGGGCTTCGCGATCGCCGTCGGCATGGCGCTGGGCATCGGCGGCGCGCTG ATCCAGGGCCACACCCGCAACCCGCTCGCAGACCCCGGCATCCTCGGCATCAACCAGGGCGCGGGCTTCGCCGTGGTCCT CGCGATCTCCCTGCTGGGCGTGACCAGCCCGCTCGGCTACGTCTGGTTCGCCTTCGCGGGCGCGCTCGCCGCCAGCGTCG TGGTCTTCCTGCTCGGCTCCGGCCGGAACGGGCCCACCCCGGTCACCCTCGCCCTCGCGGGCGCCGCGGTCAGCGCGCTG CTCCAGGGCCTGATCTCCGGCGTGGTGCTGTCCGACCGGCAGAGCCTGGACTCGTTCCGGTTCTGGCAGGTCGGCTCGGT CGAGGGGCGCGACGTCGAGGTCCTGTGGCAGGTGCTGCCGTTCCTGGTCGTCGGGCTGGTGCTCGCGGCGTTCAACGCGC CAGGGCTCAACGCCCTCTCGCTCGGCGACGAGGTGGCCCGCTCGCTGGGCCAGAACGTGAACCGCACCAGGGCGCTGGGC ATCGGCGCGATCACCCTGCTGGTCGGCGGCTCGGTCGCGGCCTGCGGGCCGATCGGCTTCCTCGGCCTGGTGGTCCCGCA CGCCGCCCGCGCGGTGACCGGGCCGGACCACCGGTGGCTGCTGCCGGTGGCCGGGCTGATGGGCGGCGTGCTGCTGCTCG TGGCGGACGTCCTCGGCCGGGTGGTCGCCCGGCCCGGCGAGTTGGAGGTCGGCATCGTGATGGCCCTGGTGGGCGCCCCG TTCTTCGTCGCGCTGGTCCGCCGCCGGAACCTGGTGAAGCTGTGA Protein sequence : MVTVRTTRRYGVLALLLGALALAAAASVAFGSKSIDLGSVAHALLSPTGTEDDSIVRELRLPRTGFAIAVGMALGIGGAL IQGHTRNPLADPGILGINQGAGFAVVLAISLLGVTSPLGYVWFAFAGALAASVVVFLLGSGRNGPTPVTLALAGAAVSAL LQGLISGVVLSDRQSLDSFRFWQVGSVEGRDVEVLWQVLPFLVVGLVLAAFNAPGLNALSLGDEVARSLGQNVNRTRALG IGAITLLVGGSVAACGPIGFLGLVVPHAARAVTGPDHRWLLPVAGLMGGVLLLVADVLGRVVARPGELEVGIVMALVGAP FFVALVRRRNLVKL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
fagA | YP_005682399.1 | hypothetical protein | Virulence | PiCp 1 | Protein | 7e-26 | 43 |
fagA | YP_003782432.1 | integral membrane protein | Virulence | PiCp 1 | Protein | 7e-26 | 43 |
fagA | YP_005684490.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 7e-26 | 43 |
fagA | YP_005680309.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 7e-26 | 43 |
fecD | AAL08452.1 | FecD | Virulence | SRL | Protein | 5e-22 | 42 |
SPN23F_09540 | YP_002510937.1 | ferric siderophore ABC transporter permease | Virulence | PPI-1 | Protein | 5e-36 | 41 |
SP_1033 | NP_345508.1 | iron ABC transporter permease | Virulence | PPI-1 | Protein | 4e-36 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Amir_0331 | YP_003098146.1 | transport system permease | BAC0163 | Protein | 3e-22 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Amir_0331 | YP_003098146.1 | transport system permease | VFG0926 | Protein | 5e-31 | 48 |
Amir_0331 | YP_003098146.1 | transport system permease | VFG1043 | Protein | 3e-22 | 42 |