Gene Information

Name : Amir_0298 (Amir_0298)
Accession : YP_003098113.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 326738 - 327556 bp
Length : 819 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ent:Ent638_1120 iron-enterobactin transporter ATP-binding protein

DNA sequence : 
ATGTCACAAGGCGACGCTCTGCTCACCGGTGAGGCGCTGGTCCTCGCGCACCACGACCGCGCCGTGGTGGAGGGCGTGTC
CCTGGAGCTGCGCGCGGGCGAGGTCACCGCGCTGGTCGGTCCCAACGGCTCGGGCAAGTCCACCGTGCTGCGCTCGCTCG
CGCGCCTGCACAAGCCCCGCGAGGGCGGCGTGCGGCTCGGCGAGCGGCAGGTGTGGGGGCGGGCGGCGCTCAGCGGCAAG
GAGTTCGCCCGCAACGTCACCCTGCTCACCCAGCACCGCCCCACCCCGTCCGGCGTGTCCGTGCGCGACGTCGTCTCCTA
CGGCCGCCACCCGCACCGCGCGGGCTGGCGCGGGGTGGACGCGGGCGGGGCCGCCGCCGTCGAGCGGGCCATGGAGCTGA
CCGGCGTCACCCCCATGGCGGGCCGGGGCGTCGACGAGCTGTCCGGCGGCGAGCTGCAGCGCGTCTGGCTGGCGTCCTGC
CTGGCGCAGGAGACCTCCGTGCTGCTGCTCGACGAGCCCACCAACCACCTGGACCTGCGCTACCAGGTCGAGGTGCTGGA
CGTGGTCCGCGACCTGGCCGACGACCACGGCGTGGCGGTCGGCGTCGTGCTGCACGACCTCGACCACGCCGGTGTGGTCG
CCGACGAGGTGGTCCTGCTGTGCGACGGCCGCGTCGTCGCCTCCGGCGCGGTGCGCGACGTGCTCACCGCGGACCACCTG
ACCAGCGCGTACGGCGTCGAGGTCCAGGTCGTCGACGACCCGGTCACCGGGGCCCCGCACTGCCGTCCGCTCGGCAAGCG
GACGCAACGCAGACCCTGA

Protein sequence : 
MSQGDALLTGEALVLAHHDRAVVEGVSLELRAGEVTALVGPNGSGKSTVLRSLARLHKPREGGVRLGERQVWGRAALSGK
EFARNVTLLTQHRPTPSGVSVRDVVSYGRHPHRAGWRGVDAGGAAAVERAMELTGVTPMAGRGVDELSGGELQRVWLASC
LAQETSVLLLDEPTNHLDLRYQVEVLDVVRDLADDHGVAVGVVLHDLDHAGVVADEVVLLCDGRVVASGAVRDVLTADHL
TSAYGVEVQVVDDPVTGAPHCRPLGKRTQRRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-41 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-42 41
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_0298 YP_003098113.1 ABC transporter BAC0164 Protein 7e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_0298 YP_003098113.1 ABC transporter VFG1042 Protein 6e-43 41
Amir_0298 YP_003098113.1 ABC transporter VFG0925 Protein 6e-46 41