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Name : Amir_3009 (Amir_3009) Accession : YP_003100775.1 Strain : Actinosynnema mirum DSM 43827 Genome accession: NC_013093 Putative virulence/resistance : Unknown Product : alpha amylase catalytic subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 3477602 - 3479269 bp Length : 1668 bp Strand : + Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: lch:Lcho_3323 alpha amylase catalytic region DNA sequence : ATGGACGCGCAGTGGTGGAAGTCGGCGGTCGTGTACCAGGTGTACCCGCGCAGCTTCGCCGACTCCGGCGGCGACGGGAT CGGGGACCTCGCGGGCATCACCTCGCGGCTCGACCACCTGGCCGCGCTCGGCGTCGACGTCGTCTGGCTCTCGCCGGTCT ACCGCTCCCCGCACGCCGACAACGGCTACGACATCTCCGACTACCGGGACATCGACCCGGTGTTCGGCACCCTCGCCGAC TTCGACCACCTGATCGGCGAGGTGCACGCCCGAGGCATGAAGCTCGTCATGGACCTCGTGGTCAACCACACCTCCGACGA GCACCCGTGGTTCGCCGAGTCCCGCTCCGGCAAGGACAACCCCAAGCGCGACTGGTACGTCTGGCGCCCGCCGAGGGACG GCCACGAGCTCGGCGAGCCGGGCGCGGAGCCGAACAACTGGTCCTCGTTCTTCTCCGGCCCCGCCTGGCAGGCCGACCCG GCCACCGGCGAGTACTACCTGCACCTGTTCGACCGCAAGCAGCCCGACCTCAACTGGGACAACCCCGAGGTGCGCGAAGC GGTCTACGACATGATGCGCTGGTGGCTCGACCGGGGCGTCGACGGCTTCCGCATGGACGTCATCAACCTCATCGCCAAGC ACCCGGACCTGCCCGACGCGCCCGCCGAACCGGGCGCCCTCGGCGACGGCTTCCCCTACTACGGCACGCTCCCGCGCGTC CACGAGCACCTGCGCGAGATGCGCCGCGAGGTGTTCGACGGCCGGGAGGGCGGGTTCCTGACCGTCGGCGAGATGCCCGG CGTGACCACGCAGCAGGCCCGCGAGTTCACCGACCCGGCGAACCACGAGATCGACATGGTGTTCCAGTTCGAGCACGTCT CGCTCGACCACGGCCCCGGCGGCAAGTTCGACCCGGTGCCGCTGGACCTGCGCGCGTTCAAGGCGTCCATGGCTGCCTGG CAGGGCGAGCTGGCCGAGGTCGGCTGGAACAGCCTCTACCTGGGCAACCACGACCAGCCCAGGGCGGTGTCGAGGTTCGG CGACGACGACCGGTGGTGGCGCGAGTCGGCGACCGCGCTCGCGACCGTCCTGCACCTGCACCGGGGCACGCCGTACGTGT ACCAGGGCGAGGAGCTGGGCATGACGAACTCGCCGTTCGTCGACGCGGAGGCCCTGCGGGACGTCGAGTCCCTCAACCAC CTGCGCCAGGCCCTCGCCGCCGGGCAGGACGCGGACGCGGTGTGGCGCGGGGTGCGGGCGATGGGGCGGGACAACGCGCG CACGCCCGTGCAGTGGGACGGCGGGACGAACGGCGGGTTCACCACCGGCACGCCGTGGATCGCGGTCAACCCGAACAGCT CCTGGCTCAACGCCGAGGCGCAGCGGGCCGACCAGGCGTCGGTGTTCCACCACTACCGCAGGCTGATCGAGCTCAGGCAC ACGCTGCCGGTGGTGGTGGAGGGGACGTTCCGGATGCTGCTGCCGGAACACCCGGACGTGTACGCGTACGAGCGGGTGCT GGGGGAGGAGCGGCTGCTGGTGGTGGCGAACCTGAGCGGGACCGAGCAGCCGGTGGACCTGGACCTGGGCGGCGAGGTGC TGCTGGCCAACGTGGAACCGGTCGGGCAGGTGCTCGCGCCCTGGCAGGCGGTGGTGCTGCGGGCCTAG Protein sequence : MDAQWWKSAVVYQVYPRSFADSGGDGIGDLAGITSRLDHLAALGVDVVWLSPVYRSPHADNGYDISDYRDIDPVFGTLAD FDHLIGEVHARGMKLVMDLVVNHTSDEHPWFAESRSGKDNPKRDWYVWRPPRDGHELGEPGAEPNNWSSFFSGPAWQADP ATGEYYLHLFDRKQPDLNWDNPEVREAVYDMMRWWLDRGVDGFRMDVINLIAKHPDLPDAPAEPGALGDGFPYYGTLPRV HEHLREMRREVFDGREGGFLTVGEMPGVTTQQAREFTDPANHEIDMVFQFEHVSLDHGPGGKFDPVPLDLRAFKASMAAW QGELAEVGWNSLYLGNHDQPRAVSRFGDDDRWWRESATALATVLHLHRGTPYVYQGEELGMTNSPFVDAEALRDVESLNH LRQALAAGQDADAVWRGVRAMGRDNARTPVQWDGGTNGGFTTGTPWIAVNPNSSWLNAEAQRADQASVFHHYRRLIELRH TLPVVVEGTFRMLLPEHPDVYAYERVLGEERLLVVANLSGTEQPVDLDLGGEVLLANVEPVGQVLAPWQAVVLRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-121 | 49 |
